| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0137 |
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| Symbol | rplK |
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| ID | 4277119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 154762 |
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| End bp | 155190 |
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| Gene Length | 429 bp |
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| Protein Length | 142 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638132887 |
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| Product | 50S ribosomal protein L11 |
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| Protein accession | YP_748838 |
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| Protein GI | 114561325 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0080] Ribosomal protein L11 |
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| TIGRFAM ID | [TIGR01632] 50S ribosomal protein L11 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000238493 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGA AAATTGAAGC TTATATTAAG CTACAAGTAG CAGCTGGCGC TGCAAACCCG
TCTCCACCAG TTGGACCTGC TTTAGGTCAA AAAGGTGTGA ACATCATGGA ATTCTGTAAA
GCATTCAACG CTCGTACTGA AAAGTTCGAA AAAGGCATGC CAATTCCTGT TGTTATCACT
GTATATAATG ACCGTTCTTT CACTTTTGAA ACTAAGACTC CACCTGCATC TTTCCTACTG
CTTAAAGCAG TTGGTCTGAA ATCAGGTTCT GGCCGTCCTA ATACTCAAAA AGTAGGTACT
ATCAAGCGTA GCGCAGTTCA GGAAATTGCT GAAACTAAAG CTGCTGATAT GACTGGTGCT
GATATTGAAG CGATGACTCG CTCAATTGAA GGTACTGCAC GTTCAATGGG TTTGGTAGTA
GAGGATTAA
|
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| Protein sequence | MAKKIEAYIK LQVAAGAANP SPPVGPALGQ KGVNIMEFCK AFNARTEKFE KGMPIPVVIT
VYNDRSFTFE TKTPPASFLL LKAVGLKSGS GRPNTQKVGT IKRSAVQEIA ETKAADMTGA
DIEAMTRSIE GTARSMGLVV ED
|
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