| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0029 |
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| Symbol | |
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| ID | 4278306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 33508 |
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| End bp | 34074 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132767 |
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| Product | SUA5/yciO/yrdC domain-containing protein |
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| Protein accession | YP_748730 |
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| Protein GI | 114561217 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.480067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCAAC TGCAGCCATC GGCTGTCGCC ACCACAATAC AACAAGGTGG CGTGATAGCT
TACCCAACAG AAGCTGTATT TGGTTTAGGA TGTGATCCTG ATAATGATAG TGCTATCGAG
AAACTGTTGG TAGTAAAACA ACGTCCTTGG CAAAAAGGCT TAATTTTGGT GGCCAGTTCA
TTTGAGCAAC TATTACCTTA TCTTGATATC ACTCAATTAA CTGAGCAACA ACTACAGTTT
GCTCAATCAA AGTGGCCTGG GCCATTTACG TTTGTTATGC CTATTCAGTC ACACGTATCA
AAATTATTGT GCGGCGAGTT TGATTCAATT GCCGTAAGGG TATCTGCTCA CCCAGTAGTT
CGAGAGCTAT GCGACACCCT CAATAAACCC CTAGTATCGA CAAGTGCCAA TTTGGCCGGT
GAGCAACCGG TGGTCGATGC ACAACATATC ATCACTGATT TTAGCGATAA AATTGATGCA
TTGATTTTAG GTAAGCTGGG CGAACAACGT CAGCCTTCAA CCATTATCGA TGCTCGCAGT
GGTCAAATTC TTCGTAATGG AAGCTAA
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| Protein sequence | MLQLQPSAVA TTIQQGGVIA YPTEAVFGLG CDPDNDSAIE KLLVVKQRPW QKGLILVASS
FEQLLPYLDI TQLTEQQLQF AQSKWPGPFT FVMPIQSHVS KLLCGEFDSI AVRVSAHPVV
RELCDTLNKP LVSTSANLAG EQPVVDAQHI ITDFSDKIDA LILGKLGEQR QPSTIIDARS
GQILRNGS
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