Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0018 |
Symbol | |
ID | 4278295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | - |
Start bp | 23262 |
End bp | 23567 |
Gene Length | 306 bp |
Protein Length | 101 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638132756 |
Product | transcriptional regulator, ArsR family protein |
Protein accession | YP_748719 |
Protein GI | 114561206 |
COG category | [K] Transcription |
COG ID | [COG0640] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.591177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAAG ATATCGATGT TGCAACCATG CTTAATAATG CAGAAACGGC AGCACAATGG CTAAAAGCCA TTGCGAATCC TTACCGCTTA ATGATTTTAT GTTTATTGTT AGAACAAGAA TTAAGTGTCA CTGAATTAAA TGAGACCGTG CCACTGAGCC AATCAGCTTT GTCACAGCAT TTAGCGGTAC TGCGTACCCA AGATTTGGTC AACACTCGTA AGAGCTCACA AGTGGTTTAC TACACGCTTA AAAATGAGCA AGTCACCGAA GTGATCTCGA TACTACATCG ACGCTATTGT GCCTAA
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Protein sequence | MKQDIDVATM LNNAETAAQW LKAIANPYRL MILCLLLEQE LSVTELNETV PLSQSALSQH LAVLRTQDLV NTRKSSQVVY YTLKNEQVTE VISILHRRYC A
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