Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfri_0015 |
Symbol | |
ID | 4277698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella frigidimarina NCIMB 400 |
Kingdom | Bacteria |
Replicon accession | NC_008345 |
Strand | + |
Start bp | 20461 |
End bp | 21075 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638132753 |
Product | hypothetical protein |
Protein accession | YP_748716 |
Protein GI | 114561203 |
COG category | [S] Function unknown |
COG ID | [COG1739] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00257] uncharacterized protein, YigZ family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.536697 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATTGAGT CATATTTAAT ACCACAAGCT AACGTACTGA TAGAAGAAGA GATAAAGCAT AGCCGCTTTA TCTCTTTGTT ATTTCATTGC CCACATCCTA ATAATATGAA GTTAGCGCTT ACTGACGTAA AGCAACAATA TCCAGGAGCC AACCATTATT GCTATGCATT TGTAGCCGGC AGCCCAGAAA ATACCATTGA TATGGGCGCT AGCGATGATG GCGAACCGTC AGGTAGTGCT GGCAAACCCA TGCTCGCATG CTTACAAGGC GCAAAAATTG GTGAGCTAGG GGTTATTGTT GTGCGTTATT TTGGTGGTAC TAAGTTGGGT GTGGGCGGTT TAGTACGTGC TTATACCTCA GGTATAAAGC AAGGATTAAC GCAAATACAG ACTCAGGTTA AGCATCTAAG GTATCCTGCA CGCTTGGTAT GCCATTATGC TCAACTCACC GATGTTGAGT ATTTTGTTGC TCAATATGAT GGCGTGGTAA TGGATAAAGA GTTTACCGAC AAAGTAGAAA TACATTTTGA ACTGGCTAAA TCGCACCATC AGGCTTTTAA TCAAGCATTA GCTACCCAGA CGCAGGGCCA GCTTCAAGTA AAGTTTACAG TTTGA
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Protein sequence | MIESYLIPQA NVLIEEEIKH SRFISLLFHC PHPNNMKLAL TDVKQQYPGA NHYCYAFVAG SPENTIDMGA SDDGEPSGSA GKPMLACLQG AKIGELGVIV VRYFGGTKLG VGGLVRAYTS GIKQGLTQIQ TQVKHLRYPA RLVCHYAQLT DVEYFVAQYD GVVMDKEFTD KVEIHFELAK SHHQAFNQAL ATQTQGQLQV KFTV
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