| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0009 |
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| Symbol | |
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| ID | 4277692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | - |
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| Start bp | 11162 |
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| End bp | 14344 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638132747 |
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| Product | amidohydrolase |
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| Protein accession | YP_748710 |
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| Protein GI | 114561197 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGACTC AAAAACTCAC CCCACTTTAC ACCGCAATAG CACTGACCCT TGGTATTTCT
GGTTTTGCTT ATGCCGAAAA TGACAAAGTA AAATGGCATG TAAATGCTCC TGAAAATGCG
CCATTAAGTA AAATAGATAT CAATGTTACC GAAGGAACAT GGATGAACGT CAATGTATCA
CCTGATGGTG AACACATTGT ATTTGATTTA TTAGGTGATA TTTATCAAAT ACCGATAGCA
GGAGGAGAAG CTAAACCACT GGCACAAGGT ATCGCTTGGC AAATGCAGCC AGTATATAGC
CCAGACGGTA AGTATATAGC TTTCACCTCT GATGAAGATG GTGGCGATAA TATTTGGATA
ATGAATGCCG ATGGTACCAA TCCACATGCA ATAACGACTG AAACGTTTCG TTTACTCAAC
AGCCCGGCTT GGAGTCCTGA CTCACAGTAT TTAGTGGCAA GAAAACACTT CACTGGTACT
CGCAGCTTAG GAGCCGGTGA AGTGTGGATG TTTCACGTTG CTGGTGGCGA AGGAGTTAAA
CTAACTGAAC GCCCTAATGA ACAAAAAGAT TTGGGTGAAC CAGCCTACTC GCCAGATGGA
CGCTATATCT ACTTTAGCCA AGATTCGACC CCAGGCAAGA CCTTTCATTA CTCAAAAGAT
TCTGTGAAAG GCATCTATAA GATTAAGCGT TATGACACCC AAACAGGCGA TATTGAAGTA
TTGATTGAGG GCACCGGTGG TGCAATTAGA CCGACACCAA GTCCTGATGG CAAAACCCTT
GCCTACATCA AACGCGATGG ATTCCAGTCG ACCTTATATA CCCTAGACTT AAAGTCTGGT
GAAGAAACCA AGCTGTATGA CAAACTCGAT CGTGACATGC AAGAAACATG GGCTATTCAC
GGTGTTTATC CAACAATGTC GTGGACTAAA GACAATAAGC ACATCGTATT TTGGGCTAAA
GGTAAAATCA ATAAACTTGA TGTCGACAGT AAACAAGTAA CAGACATTCC ATTCAGTGTT
AGCACTCAAA GAGATATTCA GCCATCGGTC CGCTTTACTC AAAACTTAGA TAAAGATGAA
TTTGATGTAA AAATGCTGCG TATGGCACAA GTATCACCAG ATGGCGAAAA AGTGGTATTT
GAAGCCTTAG GTAAAATTTG GGTTCGTGAT ATTAAAGACG GAAAACATAA ACGATTAACC
CGTTTAGATG ATGACATCAA TGAGCTATTC CCACAGTGGT CACGTGATGG TAAAGACATC
GTGTTCACTA CATGGAATGA TCAACAGCAA GGCACCGTCA GTGTTGTTAG CGCCAGAGGT
GGTAAAGCCA AGGTGTTAAC CAACGAGCCG GGCAAATATG TAGAGCCAAC TTTTTCGCCT
GATGGCGAAT ATATTGTTTA TCGAAAAGCT CGCGGTGGAT ACATGACACC ACGAACTTGG
TCACAAGAAC CGGGTTTATA TAAAGTCGAT ATAAAAGGAA AGCAAAGCAC TAAACTAACT
GCCAGTGGCC ATCAACCACA ATTTGGTAAC GACTCAGATC GTGTTTACTT TATGGATTCA
GGTGAGACCC CAGAGTTTGC ATCAATCGGT ATGAACGGTT TTGAAAAACG AACCCATTAC
ACCAGCGACC ACGCTACCGA GTTTCGTTTA TCACCAAACG GCGAGCACCT AGCTTTTGCA
GAGCGCTTTA GAGTGTACGT CACTCCTTTT GCGAAACACG GCGAAACCAT TGCTATTGGA
CCTAAAGCAA GCAACTTACC CATTACCCAA TTAAGTGCTC GTGCCGGCGA AAGCATTAGC
TGGAACGGTA AAAATAACCA ACTGTATTGG ACATTGGGCC CTGATTTATA CCAAGCCGAT
GTCGACACTC AATATACAAA ATCTGAAACC AAGGTCGATC CCAAAATAAC CTCTATTGGC
TTTAAAGATA AGGCCGATGT TCCACGTGGA ACAGTTGTGT TTACTGGCGG TAAAGTTATC
ACTATGGAGA ATGATCAGGT TATTGATAAT GGCGTTGTTA TCGTTAAAGA CAATAAAATT
GTCAGCGTTG GTGATGCCAA TACGATTATT CCTAAAAATG CTCAAGTCAT CGATATTAGC
GGTAAAACCA TTATGCCTGG CATATTTGAT GCCCATGCAC ATGGCGGCCA AGCAGATGAT
GAAATTATTC CACAGCAAAA CTGGGCCTTA TATTCTGGCT TATCACTTGG GGTAACATCT
ATTCATGATC CATCGAATGA CACAACCGAA ATTTTTGCTG CTTCCGAACA ACAAAAAGCA
GGCAATATTG TTGGACCACG TATTTTCTCA ACAGGGACTA TTTTATACGG CGCCAACTTA
CCAGGTTATA CCTCGCATGT AGATTCACTT GATGATGCAA AGTTTCACTT AGAACGTCTT
AAAAAAGTCG GTGCGTTTAG TGTTAAGAGT TACAACCAGC CACGTCGAGA TCAACGACAA
CAGATAATTG CTGCTGCACG AGAACTCGAA ATGATGGTAG TCCCTGAAGG TGGCAGTTTG
CTGCAGCACA ATTTATCTAT GATAGCGGAT GGTCACACCA CGGTAGAACA TTCGTTGCCA
GCGGCTTCTA TTTATAATGA CATCAAACAA TTTTGGAGCC AAACAGAAGT TCACTACACA
CCGACCTTAG TTGTCGCATA TGGCGGTATT TCTGGCGAGC ATTACTGGTA TGACAAAACT
GATGTTTGGG CTCACCCTCG CCTAAGCATG TATGTTCCGC ATGATATTCT TGATGCCCGT
TCAATGCGCC GCACGACCGC GCCAGACGAA CATTACAACC ATTTTAATGT TGCCCGCGTA
GCAAATGAGT TAAACAACAT TGGCGTTAAA CCCAATATTG GTGCTCACGG TCAACGAGAA
GGATTGGCTG CACATTGGGA GATGTGGATG TTTGCTCAAG GCGGTATGAG TAATATGGAA
GTATTAAAAA CAGCGACTAT TAACCCTGCC GTCACCTTCG GTATGGATCA TCAACTGGGT
TCTATTAAAG TTGGTAAATT AGCGGACTTA ATAGTGATTG ATGGCGATCC ATTAGCTGAT
ATAAGAACGA CTGATAAAGT CACTTACACC ATGGTCAATG GTAAGTTATT TAATTCAGAA
ACCATGAATC AGCTAAATGG TGATAAACAT AAACGTAAGC CATTTTTCTT TGAAAAAATC
TAA
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| Protein sequence | MLTQKLTPLY TAIALTLGIS GFAYAENDKV KWHVNAPENA PLSKIDINVT EGTWMNVNVS
PDGEHIVFDL LGDIYQIPIA GGEAKPLAQG IAWQMQPVYS PDGKYIAFTS DEDGGDNIWI
MNADGTNPHA ITTETFRLLN SPAWSPDSQY LVARKHFTGT RSLGAGEVWM FHVAGGEGVK
LTERPNEQKD LGEPAYSPDG RYIYFSQDST PGKTFHYSKD SVKGIYKIKR YDTQTGDIEV
LIEGTGGAIR PTPSPDGKTL AYIKRDGFQS TLYTLDLKSG EETKLYDKLD RDMQETWAIH
GVYPTMSWTK DNKHIVFWAK GKINKLDVDS KQVTDIPFSV STQRDIQPSV RFTQNLDKDE
FDVKMLRMAQ VSPDGEKVVF EALGKIWVRD IKDGKHKRLT RLDDDINELF PQWSRDGKDI
VFTTWNDQQQ GTVSVVSARG GKAKVLTNEP GKYVEPTFSP DGEYIVYRKA RGGYMTPRTW
SQEPGLYKVD IKGKQSTKLT ASGHQPQFGN DSDRVYFMDS GETPEFASIG MNGFEKRTHY
TSDHATEFRL SPNGEHLAFA ERFRVYVTPF AKHGETIAIG PKASNLPITQ LSARAGESIS
WNGKNNQLYW TLGPDLYQAD VDTQYTKSET KVDPKITSIG FKDKADVPRG TVVFTGGKVI
TMENDQVIDN GVVIVKDNKI VSVGDANTII PKNAQVIDIS GKTIMPGIFD AHAHGGQADD
EIIPQQNWAL YSGLSLGVTS IHDPSNDTTE IFAASEQQKA GNIVGPRIFS TGTILYGANL
PGYTSHVDSL DDAKFHLERL KKVGAFSVKS YNQPRRDQRQ QIIAAARELE MMVVPEGGSL
LQHNLSMIAD GHTTVEHSLP AASIYNDIKQ FWSQTEVHYT PTLVVAYGGI SGEHYWYDKT
DVWAHPRLSM YVPHDILDAR SMRRTTAPDE HYNHFNVARV ANELNNIGVK PNIGAHGQRE
GLAAHWEMWM FAQGGMSNME VLKTATINPA VTFGMDHQLG SIKVGKLADL IVIDGDPLAD
IRTTDKVTYT MVNGKLFNSE TMNQLNGDKH KRKPFFFEKI
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