| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfri_0004 |
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| Symbol | |
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| ID | 4277687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella frigidimarina NCIMB 400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008345 |
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| Strand | + |
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| Start bp | 3715 |
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| End bp | 6132 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638132742 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_748705 |
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| Protein GI | 114561192 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0166192 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAGA ATAGTTACGA TTCTTCGAGT ATCAAGGTAT TAAAAGGCCT TGATGCAGTC
CGTAAGAGAC CTGGTATGTA CATTGGTGAT ACTGATGATG GCACAGGTCT TCATCACATG
GTATTCGAAG TGGTCGATAA CTCTATCGAT GAAGCTTTAG CAGGCCATTG TAGTGATATC
ACCATTAGCA TTCATTCAGA TGGTTCAGTC TCAGTAAAAG ACGATGGTCG TGGTATTCCT
GTTTCGATAC ATGAAGAAGA GGGTATCTCT GCCGCTGAAG TTATTATGAC CGTACTTCAT
GCTGGCGGTA AGTTTGATGA TAACTCTTAT AAAGTCTCTG GTGGTCTGCA CGGTGTGGGT
GTATCTGTAG TTAACGCGTT ATCGCAAAAA CTGCAGTTAA CCATTCGTAG AGCAGGTAAA
GTCTATGAGC AGTTTTATAC TCATGGTGTA CCCGATGCGC CTATCAAAGA AATTGGTGAT
GCGGTTAAAA CCGGTACCGA ACTCCGCTTC TGGCCAAGTA GTGACACGTT TACTGATGTT
GAATTTCATT TTGAAATTTT AGCCAAACGC GTACGCGAAC TATCATTTTT GAACTCTGGT
GTAGGCATTC GTTTAGTTGA CGAGCGCGAC GGTAAAGATG AGTTCTTTAA GTATGAAGGC
GGTATTAGTG CTTTTGTTGA TTACTTAAAC CGTAACAAAA CGCCGATTAA CAAAGATGTT
TTCCATTTTT CTCATGAACG CGAAGACGGT ATCACCGTTG AAGTTGCTAT GCAGTGGAAC
GATGGTTATC AAGAGAATAT TTTTTGTTTT ACCAATAACA TCCCACAACG CGACGGTGGT
ACTCACTTAG CCGGTTTCCG TGGTGCATTA ACACGTAACT TGAATAACTA CATGGAACGT
GAAGGGTTTA ACAAAAAAGG TAAGACTAGT GCCACAGGTG ATGATGCGCG TGAAGGCTTG
ACCGCGGTTA TTTCAGTAAA AGTACCTGAT CCAAAGTTTA GCTCGCAAAC TAAAGACAAA
CTTGTGTCTA GTGAAGTGAA AAGCGCGGTT GAACAAACAA TGGGTGAGCA GTTAAATGAT
TACCTATTAG AAAACCCAGC CGATGCTAAA TTAATTGTTG GTAAAATTGT TGATGCTGCA
CGTGCTCGTG AAGCGGCGCG TAAAGCGCGT GAAATGACAC GTCGTAAAGG CGCGTTAGAT
TTAGGTGGTT TGCCAGGTAA ATTAGCTGAC TGCCAAGAGA AAGATCCTGG TCTTTCTGAA
ATATATATAG TGGAAGGAGA CTCTGCTGGT GGATCAGCCA AGCAGGGACG TAACCGTAAA
AACCAAGCGA TTCTTCCGCT AAAAGGTAAG ATCTTAAACG TAGAAAAAGC GCGTTTTGAC
AAGATGTTAT CTTCACAAGA AGTGGCAACG CTGATTACTG CATTAGGTTG TGGCATTGGC
CGCGATGAAT ATAATCCAGA TAAGACTCGT TATCACAACA TCATCATCAT GACCGATGCT
GACGTCGACG GCTCACACAT TCGTACTTTG CTGTTGACCT TCTTCTTCCG TCAAATGCCT
GAATTGATCC AGCGTGGCTA TATTTATATT GCTCAACCAC CACTTTTCAA AGTGAAAAAA
GGTAAGCAAG AACAGTATTT GAAAGATGAG CCAGCATTGA CTGAGTATTT AACCACTCAA
GCTCTTGATG GTACCAATAT TTATCCAAGC CCAGGTGCTT TTGGTATGTC TGGTGAGCCA
TTAGAGCGTT TAGTGGCACA GTATCGTGAA GTTGAGCGCA TTATTAAGCG CCTAGAAAAA
CGTTACCCGA CCAACCTACT TGACCGTATG TTGTATCACC CTGAAGTGAC TGCCGCAGTG
TTAAGTGATG AAGCGCAAAT GACCGAATGG TGTAATGGCT TCATTGCAGA TTTAGTTGAA
CGTGAAAGTA GCGGTATTAT TTTTACTGCC AATGTAATGC TTGACCCTGA GCGCAAGGTT
TACACCCCTA GCGTGACAAT CCGTAAGCAC GGTATCGATA CTAACTATCT ATTTGGTTAT
GACTTCTTCA CTTCATCTGA TTACCAGCGT ATCGCTAAGT TAGGCGCGGC ATTAGAGGGT
ATGATTGAAG AAGGTGGTTA TGTACAACGT GGTGAACGTG TTAAAGAAGT TGAAAGCTTC
TTAGAAGCAT TAGATTGGAC TATTAGTGAA GCGAAACGCG GCCTGTACAT ACAACGTTAT
AAAGGATTGG GCGAAATGAA CCCTGAACAA TTGTGGGAAA CTACAATGGA TCCGGAATCA
CGTCGTATGT TACGCGTTAC TATTGAAGAT GCGGTAGCTG CTGATCAGCT ATTCACATGT
TTGATGGGTG ACCAAGTTGA GCCGCGTCGT GAGTTTATTG AAACTAACGC GCTTAATGTG
GCCAACTTAG ACGTATAA
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| Protein sequence | MSENSYDSSS IKVLKGLDAV RKRPGMYIGD TDDGTGLHHM VFEVVDNSID EALAGHCSDI
TISIHSDGSV SVKDDGRGIP VSIHEEEGIS AAEVIMTVLH AGGKFDDNSY KVSGGLHGVG
VSVVNALSQK LQLTIRRAGK VYEQFYTHGV PDAPIKEIGD AVKTGTELRF WPSSDTFTDV
EFHFEILAKR VRELSFLNSG VGIRLVDERD GKDEFFKYEG GISAFVDYLN RNKTPINKDV
FHFSHEREDG ITVEVAMQWN DGYQENIFCF TNNIPQRDGG THLAGFRGAL TRNLNNYMER
EGFNKKGKTS ATGDDAREGL TAVISVKVPD PKFSSQTKDK LVSSEVKSAV EQTMGEQLND
YLLENPADAK LIVGKIVDAA RAREAARKAR EMTRRKGALD LGGLPGKLAD CQEKDPGLSE
IYIVEGDSAG GSAKQGRNRK NQAILPLKGK ILNVEKARFD KMLSSQEVAT LITALGCGIG
RDEYNPDKTR YHNIIIMTDA DVDGSHIRTL LLTFFFRQMP ELIQRGYIYI AQPPLFKVKK
GKQEQYLKDE PALTEYLTTQ ALDGTNIYPS PGAFGMSGEP LERLVAQYRE VERIIKRLEK
RYPTNLLDRM LYHPEVTAAV LSDEAQMTEW CNGFIADLVE RESSGIIFTA NVMLDPERKV
YTPSVTIRKH GIDTNYLFGY DFFTSSDYQR IAKLGAALEG MIEEGGYVQR GERVKEVESF
LEALDWTISE AKRGLYIQRY KGLGEMNPEQ LWETTMDPES RRMLRVTIED AVAADQLFTC
LMGDQVEPRR EFIETNALNV ANLDV
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