Gene SeSA_C0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_C0004 
Symbol 
ID6515238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011093 
Strand- 
Start bp2398 
End bp3933 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content51% 
IMG OID642745176 
Product43 kDa relaxation protein 
Protein accessionYP_002113008 
Protein GI194733899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGCT ACCATTGCAC CGTTAAAACC GGAGCAAAAG GCGCAGCCTT AAAACATGCT 
GATTACATTT CCAGATCCGG CGAATATAAG AGCTACAAAT CGCGGGAGGA TCTGGAGTTT 
TCGTCATCCG GTAACATGCC ATCATGGGCG AAGAAAAATC CCGCAGAACT GTGGAAAGCC 
GCAGATGAAT TTGAACGAAA AAACGGGACG GCATACCGTG AAATTGAGAT CGCATTACCG 
CGTGAACTGA CACGCGAACA ACGGATAGAA CTTGTTGAAG ATTTCGTGCA AAAGGAACTT 
GGCAATCGCC ATGCCTACCA GTACGCGATC CACAATCCGC CAGGTGCAAT CGACGGAAAG 
GAACAGCCAC ACGCGCATAT CATGTTTTGC GAGCGGATTA ATGATGGTAT TGAACGCGAT 
CCGCAGCAAT TTTTTAAACG CGCCAACAGC AAATCACCGG AGCGGGGAGG CGCAAAAAAG 
GCGAGTATTC CCCAGACCGC CGGAGAGCGA AAAGCCGCCC TTGTTGCGCT ACGTTCCCGC 
TGGGCTGATG TGCAGAATGA GCACCTTGCG CGACACGGTC ACGAGTCGCG CGTAGATCAT 
CGTTCGCTGA AAGAACAGGG CATCAAGCGC ACGCCGGAAG TTCATCTTGG CCCTGTTCAC 
GCCGCCAATC TGAACGAGGG GCAGATCGCG GCAATTCAGG AGCACAGGGC GGCGCGTCAG 
CAAGAACGCG CAGCACGCAA CCCAGCGCCA GAGCGCCAAC AGGAACTGGA GCAAAAGCAA 
AAAATCAGGA CAGTTGAGCG TTCACCGGAG TTACTGGCTC AGTACCGCAA GGTTATGAAA 
ACGGTCATTC AGGGAGAGGA AAGGCTTGCT CGTTTAGGGG ATGCCAACCC CGATGCGCTC 
AAAGAACATA AGCTGCTTCA GAATGCGAAA GCTAAAAAAG AATCTCTTTC CGAATGGAGC 
AGGCGAATAT ATGAAGGGGC ACGGTATTTA GACAAACTGG GGCGTAATGT TGTTTCCGCA 
CAAAGGGAGC TGCGGGAGCT ACAGGAACAA CGCAATGCTT TGAATGGGAT TCGTGGCCTG 
TTTCGGGGGG CTGACAAAAG GGAGATTGAT GCGCGTATTC TGGAGCAAAA AAGTGTGCTG 
GAAACCGCTG AACATGAAAG GAATGAATTC AGGAACAAGC TACAGCAAGC CGAATCCGAG 
TGGGACAAAG AAAACGCCGC TTTTAAGCGT ACCGAGGGAT ATAAGTACGT TGGGGATCTG 
GACAGGTACA GAGAACGTGA GATTCTGGCC GCGGCATCTT TAGAGAATAC CAGGCAAAAG 
GTTGCTGAAG AAGTATCCGT TGCCCGTAGC CAGATGTTAT CTCTGGAGCC TGAACTCAGT 
ATGTCTGGAG ATGAAAAAGC TCAAATGCGA CATGAGTTAC TGGCAGAAAT GGCACAGGAA 
AGGCAGCAAC AAGAAGAATA CGCACGGCGT ATACAGCAAT CTTTGGCTAG AGGAATGTTA 
AATAGTAAGG AGCGTGATCA GGGTATTGAA CGATAA
 
Protein sequence
MASYHCTVKT GAKGAALKHA DYISRSGEYK SYKSREDLEF SSSGNMPSWA KKNPAELWKA 
ADEFERKNGT AYREIEIALP RELTREQRIE LVEDFVQKEL GNRHAYQYAI HNPPGAIDGK 
EQPHAHIMFC ERINDGIERD PQQFFKRANS KSPERGGAKK ASIPQTAGER KAALVALRSR 
WADVQNEHLA RHGHESRVDH RSLKEQGIKR TPEVHLGPVH AANLNEGQIA AIQEHRAARQ 
QERAARNPAP ERQQELEQKQ KIRTVERSPE LLAQYRKVMK TVIQGEERLA RLGDANPDAL 
KEHKLLQNAK AKKESLSEWS RRIYEGARYL DKLGRNVVSA QRELRELQEQ RNALNGIRGL 
FRGADKREID ARILEQKSVL ETAEHERNEF RNKLQQAESE WDKENAAFKR TEGYKYVGDL 
DRYREREILA AASLENTRQK VAEEVSVARS QMLSLEPELS MSGDEKAQMR HELLAEMAQE 
RQQQEEYARR IQQSLARGML NSKERDQGIE R