| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_B0116 |
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| Symbol | virB1 |
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| ID | 6515177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011092 |
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| Strand | + |
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| Start bp | 97602 |
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| End bp | 98651 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642745160 |
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| Product | P-type DNA transfer ATPase VirB11 |
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| Protein accession | YP_002112992 |
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| Protein GI | 194733800 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | [TIGR02788] P-type DNA transfer ATPase VirB11 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.165684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATA AACTGACTGA TACCCCGTCA GAGGGCAACG TCGCGCTGTC ACACCTGCGC
GATCTGTTGT TCGGGGACTA CCTGAGCCGG GAGGGGCTGA CGGAAATTGC CATCAACCGC
CCCGGAGAGC TGCACACAAA AATCAACGGG GCGTGGGAAA TGCACGCCTC GCCGGTCACG
CTGCGCCAGT GCTCGTCCTT TGCCAGGGCG CTGGCCGTGT GGAACAACGA CACCATTGAT
GAAACGTCGC CTATCCTCTC GGCCACGCTC CCTACAGGAG AACGCTGCCA GATAGTGGTG
CCCCCGGCCT GTGAGCGTAA CACCATCTCA ATCACCCTGC GTAAGCCGGA CTACTTCCAG
CGCACCCATC AGTCGTATAT CGATGCCGGG TTTTATGACC GGGTGCAGGG TACAGAAAAG
GTGGAATCAA AAGACGGGGA GCTGAGCCGC ATATACCTGT CCGGGAATAT CCCGCTTTTT
ATGGAAAAGT GCGTGGAGTA CGGCAAAACG CTCTTTGTGG TGGGGGAAAC AGGCTCTGGG
AAAACCACCT ACATGAAGAT GCTGCTGCAC TACATTCCCG AGACGCTGCG CCTTATCACC
ATCGAGGACA ACCCGGAGCT GAAGTTTTAC AGCCAGAAAA ACTACGTTCA TCTGTTCTAC
CCGGCGGACG CCGGAGAGGG CGCAATAGTC ACCTCTGATC GCCTGGTGCG CGCGATTTAC
CGTATGAACC CCGACCGCCC CCTGCTCGCC GAGGTGCGTG GCCGCGAGGC GTGGGACGCA
CTCAAGCTGA TTGAGTCCGG GCACGAGGGG TTTATGTCCT CCCTGCACGC GGGCAGCCCG
CGCGAGTGTA TCTCCGGGCT GATTGACCGC TGCTACGAGC ATCCGGCGTG CCGGGGCATG
CCGGTTGACG TGCTGCTGCG CAAGGTACTG CACTGCGTCG ACGTCATTGT GAGCGTGGAC
GTTCACGGCA ACGTGCGCCG CATGAGCGAC GTCTATTTTA AACCCCTGCA CATGCAGGCT
ATGAAGGAGA GTTTCAATGA TGCTGCCTAA
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| Protein sequence | MDDKLTDTPS EGNVALSHLR DLLFGDYLSR EGLTEIAINR PGELHTKING AWEMHASPVT
LRQCSSFARA LAVWNNDTID ETSPILSATL PTGERCQIVV PPACERNTIS ITLRKPDYFQ
RTHQSYIDAG FYDRVQGTEK VESKDGELSR IYLSGNIPLF MEKCVEYGKT LFVVGETGSG
KTTYMKMLLH YIPETLRLIT IEDNPELKFY SQKNYVHLFY PADAGEGAIV TSDRLVRAIY
RMNPDRPLLA EVRGREAWDA LKLIESGHEG FMSSLHAGSP RECISGLIDR CYEHPACRGM
PVDVLLRKVL HCVDVIVSVD VHGNVRRMSD VYFKPLHMQA MKESFNDAA
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