Gene SeSA_B0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0078 
Symbol 
ID6515140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand- 
Start bp68170 
End bp68874 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content53% 
IMG OID642745125 
ProductIS26 transposase 
Protein accessionYP_002112957 
Protein GI194733779 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.753409 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAT TCAAAGGCCG GCATTTTCAG CGTGACATCA TTCTGTGGGC CGTACGCTGG 
TACTGCAAAT ACGGCATCAG TTACCGTGAG CTGCAGGAGA TGCTGGCTGA ACGCGGAGTG 
AATGTCGATC ACTCCACGAT TTACCGCTGG GTTCAGCGTT ATGCGCCTGA AATGGAAAAA 
CGGCTGCGCT GGTACTGGCG TAACCCTTCC GATCTTTGCC CGTGGCACAT GGATGAAACC 
TACGTGAAGG TCAATGGCCG CTGGGCGTAT CTGTACCGGG CCGTCGACAG CCGGGGCCGC 
ACTGTCGATT TTTATCTCTC CTCCCGTCGT AACAGCAAAG CTGCATACCG GTTTCTGGGT 
AAAATCCTCA ACAACGTGAA GAAGTGGCAG ATCCCACGAT TCATCAACAC GGATAAAGCG 
CCCGCCTATG GTCGCGCGCT TGCTCTGCTC AAACGCGAAG GCCGGTGCCC GTCTGACGTT 
GAACACCGAC AGATTAAGTA CCGGAACAAC GTGATTGAAT GCGATCATGG CAAACTGAAA 
CGGATAATCA ACGCCACGCT GGGATTTAAA TCCATGAAGA CGGCTTACGC CACCATCAAA 
GGTATTGAGG TGATGCGTGC ACTACGCAAA GGCCAGGCCT CAGCATTTTA TTATGGTGAT 
CCCCTGGGCG AAATGCGCCT GGTAAGCAGA GTTTTTGAAA TGTAA
 
Protein sequence
MNPFKGRHFQ RDIILWAVRW YCKYGISYRE LQEMLAERGV NVDHSTIYRW VQRYAPEMEK 
RLRWYWRNPS DLCPWHMDET YVKVNGRWAY LYRAVDSRGR TVDFYLSSRR NSKAAYRFLG 
KILNNVKKWQ IPRFINTDKA PAYGRALALL KREGRCPSDV EHRQIKYRNN VIECDHGKLK 
RIINATLGFK SMKTAYATIK GIEVMRALRK GQASAFYYGD PLGEMRLVSR VFEM