Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_B0064 |
Symbol | |
ID | 6515166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011092 |
Strand | - |
Start bp | 56689 |
End bp | 57948 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 642745111 |
Product | chloramphenicol resistance protein |
Protein accession | YP_002112943 |
Protein GI | 194733791 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily [TIGR00880] Multidrug resistance protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.629663 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCTCAA AAAACTTTAG TTGGCGGTAC TCCCTTGCCG CCACGGTGTT GTTGTTATCA CCGTTCGATT TATTGGCATC ACTCGGCATG GACATGTACT TGCCAGCAGT GCCGTTTATG CCAAACGCGC TTGGTACGAC AGCGAGCACA ATTCAGCTTA CGCTGACAAC GTACTTGGTC ATGATTGGTG CCGGTCAGCT CTTGTTTGGA CCGCTATCGG ACCGACTGGG GCGCCGCCCC GTTCTACTGG GAGGTGGCCT CGCCTACGTT GTGGCGTCAA TGGGCCTCGC TCTTACGTCA TCGGCTGAAG TCTTTCTGGG GCTTCGGATT CTTCAGGCTT GTGGTGCCTC GGCGTGCCTT GTTTCCACAT TTGCAACAGT ACGTGACATT TACGCAGGTC GCGAGGAAAG TAATGTCATT TACGGCATAC TCGGATCCAT GCTGGCCATG GTCCCGGCGG TAGGCCCATT GCTCGGAGCG CTCGTCGACA TGTGGCTTGG GTGGCGGGCT ATCTTTGCGT TTCTAGGTTT GGGCATGATC GCTGCATCTG CAGCAGCGTG GCGATTCTGG CCTGAAACCC GGGTGCAACG AGTTGCGGGC TTGCAATGGT CGCAGCTGCT ACTCCCCGTT AAGTGCCTGA ACTTCTGGTT GTACACGTTG TGTTACGCCG CTGGAATGGG TAGCTTCTTC GTCTTTTTCT CCATTGCGCC CGGACTAATG ATGGGCAGGC AAGGTGTGTC TCAGCTTGGC TTCAGCCTGC TGTTCGCCAC AGTGGCAATT GCCATGGTGT TTACGGCTCG TTTTATGGGG CGTGTGATAC CCAAGTGGGG CAGCCCAAGT GTCTTGCGAA TGGGAATGGG ATGCCTGATA GCTGGAGCAG TATTGCTTGC CATCACCGAA ATATGGGCTT TGCAGTCCGT GTTAGGCTTT ATTGCTCCAA TGTGGCTAGT GGGTATTGGT GTCGCCACAG CGGTATCTGT GGCGCCCAAT GGCGCTCTTC GAGGATTCGA CCATGTTGCT GGAACGGTCA CGGCAGTCTA CTTCTGCTTG GGCGGTGTAC TGCTAGGAAG CATCGGAACG TTGATCATTT CGCTGTTGCC GCGCAACACG GCTTGGCCGG TTGTCGTGTA CTGTTTGACC CTTGCAACAG TCGTGCTCGG TCTGTCTTGT GTTTCCCGAG TGAAGGGCTC TCGCGGCCAG GGGGAGCATG ATGTGGTCGC GCTACAAAGT GCGGAAAGTA CATCAAATCC CAATCGTTGA
|
Protein sequence | MSSKNFSWRY SLAATVLLLS PFDLLASLGM DMYLPAVPFM PNALGTTAST IQLTLTTYLV MIGAGQLLFG PLSDRLGRRP VLLGGGLAYV VASMGLALTS SAEVFLGLRI LQACGASACL VSTFATVRDI YAGREESNVI YGILGSMLAM VPAVGPLLGA LVDMWLGWRA IFAFLGLGMI AASAAAWRFW PETRVQRVAG LQWSQLLLPV KCLNFWLYTL CYAAGMGSFF VFFSIAPGLM MGRQGVSQLG FSLLFATVAI AMVFTARFMG RVIPKWGSPS VLRMGMGCLI AGAVLLAITE IWALQSVLGF IAPMWLVGIG VATAVSVAPN GALRGFDHVA GTVTAVYFCL GGVLLGSIGT LIISLLPRNT AWPVVVYCLT LATVVLGLSC VSRVKGSRGQ GEHDVVALQS AESTSNPNR
|
| |