Gene SeSA_B0024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0024 
Symbol 
ID6515146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand- 
Start bp23450 
End bp24280 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content54% 
IMG OID642745074 
Productintegrase core domain protein 
Protein accessionYP_002112906 
Protein GI194733821 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.73785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.509225 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGATGT GTGATGCGAC CGGTCTGTCG CAACGTCGTG CCTGCAGGCT TACAGGTTTA 
TCCCTGTCGA CCTGCCGCTA TGAGGCTCAC CGTCCGGCTG CTGATGCGCA TTTATCAGGG 
CGCATCACTG AGCTGGCACT GGAGCGCAGG CGTTTTGGCT ACCGTCGTAT TTGGCAGTTG 
CTGCGCCGTG AAGGGCTTCA TGTTAATCAT AAGCGCGTGT ACCGGCTTTA TCACCTCAGT 
GGCCTGGGCG TAAAACGCAG AAGACGTCGT AAAGGGCTGG CAACAGAACG TCTGCCGCTG 
CTCCGTCCGG CGGCGCCCAA TCTGACCTGG TCGATGGATT TCGTCATGGA CGCACTTTCC 
ACCGGTCGCA GGATCAAGTG TCTTACCTGC GTCGATGATT TCACAAAGGA ATGCCTGACG 
GTCACTGTTG CCTTTGGGAT TTCAGGCGTT CAGGTCACGC GTATTCTGGA CAGCATTGCA 
CTGTTTCGAG GCTATCCGGC GACGATAAGA ACTGACCAGG GGCCGGAGTT CACTTGCCGT 
GCACTGGATC AATGGGCCTT TGAGCATGGT GTTGAGTTGC GCTTAATCCA GCCGGGCAAG 
CCAACGCAGA ACGGATTTAT TGAGAGCTTT AACGGACGAT TTCGCGATGA ATGTTTGAAT 
GAGCACTGGT TCAGCGATAT CGTTCATGCC AGGAAAATTA TTAATGACTG GCGGCAGGAT 
TATAACGAAT GCCGCCCGCA CTCCACGCTG AATTATCAGA CACCGTCTGA ATTTGCAGCG 
GGCTGGAGAA AGGGTCATTC TGAGAATGAA GATTCCGACG TTACTAACTG A
 
Protein sequence
MLMCDATGLS QRRACRLTGL SLSTCRYEAH RPAADAHLSG RITELALERR RFGYRRIWQL 
LRREGLHVNH KRVYRLYHLS GLGVKRRRRR KGLATERLPL LRPAAPNLTW SMDFVMDALS 
TGRRIKCLTC VDDFTKECLT VTVAFGISGV QVTRILDSIA LFRGYPATIR TDQGPEFTCR 
ALDQWAFEHG VELRLIQPGK PTQNGFIESF NGRFRDECLN EHWFSDIVHA RKIINDWRQD 
YNECRPHSTL NYQTPSEFAA GWRKGHSENE DSDVTN