Gene SeSA_B0020 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_B0020 
Symbol 
ID6515219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011092 
Strand- 
Start bp16415 
End bp17437 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content55% 
IMG OID642745070 
Producttransposase for insertion sequence 
Protein accessionYP_002112902 
Protein GI194733790 
COG category[L] Replication, recombination and repair 
COG ID[COG4584] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACTT TTGAGATTCG TATGGAAATT AAAGTCCTGC ACAAGCGGGG AATGAGTATC 
CGGGCCATTG CCAGGGAGCT GGGTATTTCG CGCAATACTG TCCGCAGCCA CCTGAAAGCC 
AAATCTGAAA AGCCGCAGTA TTCACCACGC CCGGCACCAT CATCACTGCT CGATGAATAC 
CGTGATTACA TCTCTAAGCG GATCAGCGAT GCGCATCCCT ACAAAATCCC GGCGACCGTT 
ATTGCCAGGG AAATCATGGA GCTGGGCTAT CGTGGAGGGC TTACTATCCT GAGAGAGTTC 
ATCCGTAAAC AGACCCTGCC AGCACAGGCA GAACCGGTCG TTCGCTTCGA AACCGAGCCC 
GGACGGCAGA TGCAGGTTGA CTGGGGGACC ATGCGAAACG GCAAGTCACC CCTGCATGTG 
TTCGTCGCTG TTCTGGGATA CAGCAGAATG CTTTACATCG AGTTCACCGA CAACATGCGC 
TACGACACGC TGGAAGCCTG TCACCGCAAT GCGTTCAGCT TCTTCGGCGG TGTACCGCAG 
GAAGTCCTGT ACGACAATAT GAAAACGGTG GTGCTGCAGC GTGATGCTTA CCAGACCGGG 
CAGCACCGGT TCCATCCTTC CCTGTGGCAG TTCGGCAAAG AGATGGGCTT CTCTCCCCGC 
CTGTGCCGTC CCTTCAGGGC GCAGACTAAA GGCAAGGTGG AGAGGATGGT GCAGTACGCC 
CGCAACAGCT TCTATATCCC GTTAATGACA CGCCTGCGTC CGATGGGGAT CACCGTCGAT 
GTTGAAACCG CAAACCGTTA CGGCCTGCGC TGGCTGTACG ATGTGGCCAA TCAACGTAAG 
CATGAAACTA TCCAGACCCG CCCCTGCGAT CGCTGGGTGG AGGAACAGCA ATCCATGCTG 
GCACTGCCAC CGGAGAAAAA ACAGTATGAC GTGCAGGTTG ATGAAAGCCT GATGACCTTC 
GACAGGCAGC CGTTGCATCA TCCGCTCTCC ATCTATGACA CGTTCTGCAG AGGAGCCGCA 
TGA
 
Protein sequence
MITFEIRMEI KVLHKRGMSI RAIARELGIS RNTVRSHLKA KSEKPQYSPR PAPSSLLDEY 
RDYISKRISD AHPYKIPATV IAREIMELGY RGGLTILREF IRKQTLPAQA EPVVRFETEP 
GRQMQVDWGT MRNGKSPLHV FVAVLGYSRM LYIEFTDNMR YDTLEACHRN AFSFFGGVPQ 
EVLYDNMKTV VLQRDAYQTG QHRFHPSLWQ FGKEMGFSPR LCRPFRAQTK GKVERMVQYA 
RNSFYIPLMT RLRPMGITVD VETANRYGLR WLYDVANQRK HETIQTRPCD RWVEEQQSML 
ALPPEKKQYD VQVDESLMTF DRQPLHHPLS IYDTFCRGAA