Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4822 |
Symbol | deoA |
ID | 6515749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 4678746 |
End bp | 4680068 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642749754 |
Product | thymidine phosphorylase |
Protein accession | YP_002117483 |
Protein GI | 194734315 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0213] Thymidine phosphorylase |
TIGRFAM ID | [TIGR02643] thymidine phosphorylase [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.524384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTCTCG CACAAGAAAT TATTCGTAAA AAGCGTGATG GTCATGCGTT GAGTGACGAA GAAATTCGTT TCTTTATCAA TGGTATTCGT GACAATACTA TCTCTGAAGG GCAGATTGCC GCCCTGGCGA TGACCATCTT CTTCCACGAT ATGACCATGC CGGAGCGTGT TTCGCTGACC ATGGCGATGC GGGATTCCGG TTCTGTCCTT GACTGGAAAA GCCTGAATCT CAATGGCCCG ATTGTCGATA AGCATTCGAC CGGCGGCGTA GGGGACGTGA CGTCTCTGAT GCTGGGGCCA ATGGTAGCGG CCTGCGGCGG TTATGTACCG ATGATCTCCG GTCGCGGCCT CGGACATACC GGCGGTACGC TCGATAAACT GGAAGCGATC CCGGGCTTCG ACATCTTCCC GGACGACAAC CGTTTCCGCG AAATTATTCA AGACGTGGGT GTGGCGATTA TTGGGCAAAC CAGCTCGCTT GCACCGGCGG ACAAACGTTT TTACGCCACC CGCGATATTA CCGCGACGGT GGACTCTATT CCGCTGATCA CTGGTTCCAT CCTCGCCAAG AAACTGGCCG AAGGGCTGGA TGCGCTGGTA ATGGACGTCA AAGTCGGCAG CGGCGCGTTT ATGCCAACCT ATGAACTTTC TGAAGCCCTT GCTGAAGCGA TTGTCGGCGT GGCAAACGGC GCGGGAGTTC GCACTACGGC GTTGTTAACC GATATGAATC AGGTGCTGGC TTCAAGCGCC GGTAACGCGG TGGAAGTGCG TGAAGCCGTG CAGTTCCTGA CCGGTGAATA CCGCAATCCG CGCTTGTTTG ACGTCACTAT GGCGCTATGT GTGGAGATGC TGATCTCCGG CCAGCTGGCG AAAGACGACG CCGAAGCGCG TGCCAAACTG CAGGCGGTGC TGGATAACGG TAAAGCGGCA GAAGTCTTTG GTCGTATGGT GGCCGCGCAG AAAGGGCCGA GCGATTTCGT TGAGAACTAC GATAAATACC TGCCGACCGC CATGTTGAGC AAAGCGGTAT ATGCTGATAC CGAAGGGTTT ATCAGCGCAA TGGATACGCG TGCGCTGGGG ATGGCGGTCG TCTCGATGGG CGGTGGGCGT CGTCAGGCGT CTGATACCAT TGATTACAGC GTTGGCTTTA CCGACATGGC CCGTCTGGGC GACAGCATCG ACGGGCAGCG CCCGCTGGCG GTGATTCATG CCAAAGACGA AACCAGTTGG CAGGAAGCGG CGAAGGCCGT CAAAGCGGCA ATTATCCTTG ACGATAAAGC GCCAGCAAGC ACACCTTCGG TCTATCGTCG AATTACTGAA TAG
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Protein sequence | MFLAQEIIRK KRDGHALSDE EIRFFINGIR DNTISEGQIA ALAMTIFFHD MTMPERVSLT MAMRDSGSVL DWKSLNLNGP IVDKHSTGGV GDVTSLMLGP MVAACGGYVP MISGRGLGHT GGTLDKLEAI PGFDIFPDDN RFREIIQDVG VAIIGQTSSL APADKRFYAT RDITATVDSI PLITGSILAK KLAEGLDALV MDVKVGSGAF MPTYELSEAL AEAIVGVANG AGVRTTALLT DMNQVLASSA GNAVEVREAV QFLTGEYRNP RLFDVTMALC VEMLISGQLA KDDAEARAKL QAVLDNGKAA EVFGRMVAAQ KGPSDFVENY DKYLPTAMLS KAVYADTEGF ISAMDTRALG MAVVSMGGGR RQASDTIDYS VGFTDMARLG DSIDGQRPLA VIHAKDETSW QEAAKAVKAA IILDDKAPAS TPSVYRRITE
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