Gene SeSA_A4782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4782 
Symbol 
ID6517563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4641832 
End bp4642647 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content57% 
IMG OID642749714 
Productnegative transcriptional regulator of cel operon 
Protein accessionYP_002117446 
Protein GI194734218 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0663748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTTA TCCGAGATAT TCACCAACGC TTCTGGCGTC TGCCACAACT GCCGTGGCTG 
GAACTACGTA CCACCAGTGA AAGCCGTCAG GCCTATAAGC GCCACAGCCA CCCACAACTG 
TCGCTGGGCG CAATCATCGC AGGAGAAACC CGCTGCATCA GTAACGGGCA AGAGTATCTG 
TTACGCCCCG GCGAGCTGAT CCTGATCCCC CCGCAATCTC CACACAGTTG TAACCCGCTC 
CACGAGCGAC CACGCAGCTA TCATATGCTG TATCTCGATG CGGACTGGTG CCTGACGCAG 
CTCCCCCATT TGCCGGCGAA TAGCCGCCTG CATACCACGC AGCCACAGTT GCAGGACCCG 
CAGCTTTTCC AGCTTTATCA GCAAATTGTG ACGTCTATTA CTCAGCAACA AACCGCCGGA 
CTTCCGGCGC TTATTATCCA CCTGTTGCGC GCCCTGCCGC TACAAAGCGC CGACGCCGAA 
CCGCCATGCG CCATCAGCCG CCAGTTGGTT GCCCGCTTAG TCAGCAACCT TCAGGAACCG 
CCGACGCTGG ACACACTGGC GCAGGAGTTT GCGCTCCGTA AGGAGACTCT GATTCGCACT 
TTTAAGCAGG ATACAGGCCT GACTCCTGTC AGCTTTACCA ATATGGCCCG CATTGAATAT 
GCCCGGCACC GATTGCGCGC CGGGGACGAT ATTGCCGATG TTGCCTATCA GACCGGTTTC 
GCCGATCAAA GTCATTTCCA CAAAACCTTC GTCAGCTACA CGGCGGCAAC GCCGCGTCAG 
TACGCGCAGA ACAGATCAAT ATCCGACAAT AAATAG
 
Protein sequence
MPLIRDIHQR FWRLPQLPWL ELRTTSESRQ AYKRHSHPQL SLGAIIAGET RCISNGQEYL 
LRPGELILIP PQSPHSCNPL HERPRSYHML YLDADWCLTQ LPHLPANSRL HTTQPQLQDP 
QLFQLYQQIV TSITQQQTAG LPALIIHLLR ALPLQSADAE PPCAISRQLV ARLVSNLQEP 
PTLDTLAQEF ALRKETLIRT FKQDTGLTPV SFTNMARIEY ARHRLRAGDD IADVAYQTGF 
ADQSHFHKTF VSYTAATPRQ YAQNRSISDN K