Gene SeSA_A4735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4735 
Symbol 
ID6518440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4599484 
End bp4600566 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content56% 
IMG OID642749667 
Productinner membrane protein YjgQ 
Protein accessionYP_002117400 
Protein GI194738007 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0130058 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.215527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCAT TTGGTGTACT TGACCGCTAT ATCGGTAAAA CCATTTTTAC CACCATCATG 
ATGACGTTGT TCATGCTGGT GTCGCTCTCC GGGATCATCA AGTTTGTCGA TCAGCTGAAA 
AAAGCGGGGC AGGGTAACTA CGACGCGCTG GGCGCGGGTA TGTACACCCT GCTCAGCGTA 
CCTAAGGATA TCCAGATCTT CTTTCCTATG GCGGCGCTGC TTGGCGCGCT GCTGGGACTG 
GGGATGCTGG CGCAGCGTAG CGAACTGGTG GTGATGCAGG CATCGGGTTT CACCCGTATG 
CAGGTGGCGC TGTCGGTGAT GAAAACGGCT ATCCCCCTGG TGCTGTTAAC CATGGCGATC 
GGCGAATGGG TCGCCCCGCA GGGCGAGCAG ATGGCGCGTA ACTATCGTGC GCAGGCGATG 
TATGGCGGTT CGCTGCTTTC CACCCAGCAA GGTCTGTGGG CGAAAGACGG GAATAACTTT 
GTCTATATTG AACGGGTGAA GGGCGACGAG GAGCTGGCCG GCATTAGTAT TTACGCTTTC 
AACGATCAGC GTCGTTTGCA GTCGGTGCGT TACGCCGCTT CGGCAAAATT CGACCCGGAG 
CATAAGGTCT GGCGTTTGTC GCAGGTGGAT GAGTCCGATC TGCAAAACCC GAAACAGATC 
ACCGGTTCGC AGACGGTGAG CGGTACCTGG AAAACGAATC TGACGCCGGA TAAGTTAGGT 
GTGGTGGCGC TGGACCCGGA TGCGCTTTCC ATCAGCGGTC TGCATAACTA CGTTAAATAT 
CTGAAGTCGA GCGGACAGGA CGCCGGACGT TATCAGCTCA ATATGTGGAG TAAAATCTTC 
CAGCCGCTCT CCGTGGCGGT GATGATGCTG ATGGCGCTGT CGTTTATCTT TGGCCCACTG 
CGTAGTGTGC CGATGGGCGT GCGCGTGGTG ACGGGGATTA GCTTCGGCTT CGTCTTTTAC 
GTTCTCGACC AGATTTTTGG CCCGCTGACG CTGGTATACG GCATTCCGCC GATTGTCGGC 
GCGCTGCTGC CGAGCGCGTC TTTCTTCCTG ATTAGCCTGT GGCTAATGCT GCGTAAGTCG 
TAA
 
Protein sequence
MQPFGVLDRY IGKTIFTTIM MTLFMLVSLS GIIKFVDQLK KAGQGNYDAL GAGMYTLLSV 
PKDIQIFFPM AALLGALLGL GMLAQRSELV VMQASGFTRM QVALSVMKTA IPLVLLTMAI 
GEWVAPQGEQ MARNYRAQAM YGGSLLSTQQ GLWAKDGNNF VYIERVKGDE ELAGISIYAF 
NDQRRLQSVR YAASAKFDPE HKVWRLSQVD ESDLQNPKQI TGSQTVSGTW KTNLTPDKLG 
VVALDPDALS ISGLHNYVKY LKSSGQDAGR YQLNMWSKIF QPLSVAVMML MALSFIFGPL 
RSVPMGVRVV TGISFGFVFY VLDQIFGPLT LVYGIPPIVG ALLPSASFFL ISLWLMLRKS