Gene SeSA_A4580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4580 
Symbol 
ID6515508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp4458133 
End bp4458930 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content56% 
IMG OID642749521 
Productchaperone protein ClpE 
Protein accessionYP_002117257 
Protein GI194736277 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3121] P pilus assembly protein, chaperone PapD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.393478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA AACAGACCCA GAAAATGCGT TCTTTTTTCC GTAACAGAGT GACGAAGGCG 
CTGGGAATGA CCCTGGCCCT GATGATGGCG AGCCAGAGTG TGCTGGCTTC CCTAGCGGCG
GACCAGACCC GCTATATTTT TCGCGGCGAC AAGGACGCGC TGACCATCAC GGTGACCAAC
AATGACAAGG AGCGTACTTT CGGCGGCCAG GCGTGGGTGG ACAATATTGT GGAGAAAGAC
ACCCGCCCGA CGTTTGTGGT GACGCCCTCC TTCTTTAAGG TGAAACCGCA GGGGCAGCAG
ACGCTGCGTA TCATCATGGC CTCTGACCAC CTGCCGAAGG ATAAAGAGTC AGTGTACTGG
CTGAACCTGC AGGATATTCC GCCGGCGCTG AAGGGCAGCG GAATTGCCAT TGCCCTGCGC
ACGAAGCTGA AGCTGTTCTA CCGCCCGGAG GCGCTGCTGA AGGACCGTAA AGGCGCCGAG
GAAGGCATCA GCCTGCAGGT CCGTCCGGAC GGGCGGACGA TGCTGGTCAA CACCACGCCG
TATATCTACG CCATCGGCAG CCTGCTGGAT GCGAACGGTA AAAAAGTTGC GGTGGACAAC
GACACGGCTC AGAAACTGCT GATGTTTATG CCGGGGGATG AGGTGCAGGT GAAGGGGAAT
GTGGTGAAGG TGGATTCCCT GAACGATTAC GGCGAGCTGC AGACCTGGAC CATCAACCAG
AAAAAAACGG CGACTTCTCC CAGGCAGAAG ACATCTGATA CGGCGGTTAA TTCGTCTGAT
AAAGCAGGTA AAAAATAA
 
Protein sequence
MTMKQTQKMR SFFRNRVTKA LGMTLALMMA SQSVLASLAA DQTRYIFRGD KDALTITVTN 
NDKERTFGGQ AWVDNIVEKD TRPTFVVTPS FFKVKPQGQQ TLRIIMASDH LPKDKESVYW
LNLQDIPPAL KGSGIAIALR TKLKLFYRPE ALLKDRKGAE EGISLQVRPD GRTMLVNTTP
YIYAIGSLLD ANGKKVAVDN DTAQKLLMFM PGDEVQVKGN VVKVDSLNDY GELQTWTINQ
KKTATSPRQK TSDTAVNSSD KAGKK