Gene SeSA_A4275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4275 
SymbolcpxA 
ID6516553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp4145425 
End bp4146798 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content57% 
IMG OID642749235 
Producttwo-component sensor protein 
Protein accessionYP_002116982 
Protein GI194737962 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGGAA GTTTAACCGC GCGCATCTTC GCCATCTTCT GGTTGACGCT GGCGCTGGTG 
CTAATGCTGG TACTGATGTT GCCCAAGCTC GATTCACGCC AGATGACCGA GCTGCTGGAC 
AGCGAGCAGC GCCAGGGATT GATGATAGAG CAACATGTAG AAGCTGAACT TGCGAACGAT 
CCACCCAACG ACCTGATGTG GTGGCGTCGC CTGTTCCGCG CGATCGATAA GTGGGCGCCG 
CCTGGACAGC GGTTATTACT GGTGACCTCT GAAGGACGCG TGATCGGCGC TGAACGCAGC 
GAAATGCAGA TCATTCGTAA CTTCATTGGT CAGGCGGATA ACGCCGATCA TCCGCAGAAG 
AAAAAATATG GCCGCGTAGA GATGGTGGGG CCGTTCTCCG TTCGCGACGG AGAGGATAAT 
TACCAGCTTT ACCTGATTCG ACCGGCCAGC AGTTCGCAAT CCGATTTTAT TAATCTGCTG 
TTTGACCGCC CGCTCCTGTT GCTCATTGTC ACGATGCTGG TCAGTTCGCC GCTCTTACTA 
TGGCTGGCAT GGAGTCTGGC GAAACCGGCG CGTAAGTTGA AAAACGCGGC TGATGAAGTG 
GCGCAAGGCA ACCTGCGTCA GCATCCGGAG CTGGAGGCGG GTCCGCAGGA GTTCCTCGCC 
GCTGGCGCCA GTTTTAACCA GATGGTGACG GCGCTGGAAC GGATGATGAC CTCGCAGCAG 
CGTTTGCTGT CAGATATCTC CCATGAGCTG CGAACGCCCC TTACGCGCCT GCAACTGGGT 
ACCGCGCTGC TGCGTCGTCG TGGCGGCGAA AGCAAAGAGC TGGAGCGTAT TGAAACCGAA 
GCGCAGCGTC TGGACAGCAT GATCAATGAC CTGCTGGTGA TGTCGCGTAA CCAACAGAAA 
AACGCGCTGG TCAGCGAAAC GATGAAAGCC AATCAGCTAT GGGGCGAAGT GCTGGATAAC 
GCCGCCTTTG AAGCCGAACA GATGGGCAAG TCGTTAACGG TAAATTATCC GCCGGGGCCG 
TGGCCGCTCT ATGGCAACCC AAACGCGCTG GAAAGCGCGC TGGAAAATAT TGTTCGTAAT 
GCGCTGCGCT ATTCACATAC GAAGATTGAA GTCGGCTTCT CGGTGGATAA AGACGGTATT 
ACGATCACGG TCGATGACGA CGGGCCGGGC GTCAGCCCTG AAGACCGCGA GCAGATCTTC 
CGTCCGTTCT ATCGCACTGA TGAGGCGCGC GACCGTGAAT CCGGTGGTAC TGGCCTGGGT 
CTGGCGATTG TCGAAAGCGC CATGCAGCAG CACCGCGGCT GGGTTAAGGC TGACGATAGC 
CCGCTCGGCG GGTTGCGGCT CACGCTGTGG CTACCGCTGT ACAAGCGAAC CTAA
 
Protein sequence
MIGSLTARIF AIFWLTLALV LMLVLMLPKL DSRQMTELLD SEQRQGLMIE QHVEAELAND 
PPNDLMWWRR LFRAIDKWAP PGQRLLLVTS EGRVIGAERS EMQIIRNFIG QADNADHPQK 
KKYGRVEMVG PFSVRDGEDN YQLYLIRPAS SSQSDFINLL FDRPLLLLIV TMLVSSPLLL 
WLAWSLAKPA RKLKNAADEV AQGNLRQHPE LEAGPQEFLA AGASFNQMVT ALERMMTSQQ 
RLLSDISHEL RTPLTRLQLG TALLRRRGGE SKELERIETE AQRLDSMIND LLVMSRNQQK 
NALVSETMKA NQLWGEVLDN AAFEAEQMGK SLTVNYPPGP WPLYGNPNAL ESALENIVRN 
ALRYSHTKIE VGFSVDKDGI TITVDDDGPG VSPEDREQIF RPFYRTDEAR DRESGGTGLG 
LAIVESAMQQ HRGWVKADDS PLGGLRLTLW LPLYKRT