Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A4189 |
Symbol | fadA |
ID | 6517397 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 4066519 |
End bp | 4067682 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642749155 |
Product | 3-ketoacyl-CoA thiolase |
Protein accession | YP_002116907 |
Protein GI | 194735609 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02445] fatty oxidation complex, beta subunit FadA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAACAGG TTGTCATTGT CGATGCTATT CGCACCCCGA TGGGCCGTTC GAAGGGCGGC GCGTTTCGCA ACGTGCGGGC AGAAGATCTC TCCGCCCACT TAATGCGTAG CCTGCTGGCG CGTAATCCGT CGCTTACAGC GGCGACCCTC GATGATATTT ACTGGGGCTG CGTACAACAA ACGCTGGAGC AAGGCTTCAA CATTGCCCGT AACGCCGCGC TGCTGGCAGA AATTCCCCAT TCGGTACCGG CGGTCACCGT CAACCGTCTG TGTGGTTCCT CGATGCAGGC GTTACACGAT GCAGCGCGAA TGATCATGAC CGGCGATGCG CAGGTTTGTC TGGTTGGCGG CGTGGAGCAT ATGGGGCACG TGCCGATGAG TCACGGCGTG GATTTTCACC CGGGTCTGAG TCGCAACGTC GCCAAAGCGG CAGGGATGAT GGGGCTAACG GCGGAAATGC TCTCCCGCCT GCACGGCATT AGCCGGGAAA TGCAGGACCA GTTCGCCGCG CGTTCTCACG CTCGCGCCTG GGCCGCCACC CAGTCTGGTG CATTCAAAAC GGAGATTATC CCAACTGGCG GTCATGATGC AGACGGCGTG TTGAAGCAGT TTAGCTACGA TGAAGTGATC CGCCCGGAAA CCACGGTCGA AGCGCTATCA ACGCTGCGTC CGGCATTTGA TCCGGTTAGT GGCACGGTCA CGGCGGGCAC CTCATCCGCG CTTTCCGATG GCGCAGCCGC CATGCTGGTA ATGAGCGAAA GTCGTGCCCG TGAGCTGGGC CTGAAACCTC GCGCCCGTAT TCGTTCAATG GCAGTGGTTG GTTGTGATCC GTCAATTATG GGTTACGGGC CGGTTCCGGC GTCAAAACTG GCGTTGAAAA AAGCGGGACT GTCGGCCAGC GATATCGATG TGTTTGAGAT GAACGAAGCG TTTGCCGCAC AGATCCTGCC ATGCATTAAG GATCTGGGAT TGATGGAGCA GATAGACGAG AAGATCAACC TCAACGGCGG CGCGATCGCG CTTGGTCATC CGCTCGGCTG CTCCGGAGCA CGTATCAGCA CCACGCTTAT CAACCTGATG GAGCGCAAAG ACGCGCAGTT TGGTCTGGCG ACGATGTGTA TTGGTCTGGG TCAGGGCATC GCCACGGTGT TTGAGCGGGT TTAA
|
Protein sequence | MEQVVIVDAI RTPMGRSKGG AFRNVRAEDL SAHLMRSLLA RNPSLTAATL DDIYWGCVQQ TLEQGFNIAR NAALLAEIPH SVPAVTVNRL CGSSMQALHD AARMIMTGDA QVCLVGGVEH MGHVPMSHGV DFHPGLSRNV AKAAGMMGLT AEMLSRLHGI SREMQDQFAA RSHARAWAAT QSGAFKTEII PTGGHDADGV LKQFSYDEVI RPETTVEALS TLRPAFDPVS GTVTAGTSSA LSDGAAAMLV MSESRARELG LKPRARIRSM AVVGCDPSIM GYGPVPASKL ALKKAGLSAS DIDVFEMNEA FAAQILPCIK DLGLMEQIDE KINLNGGAIA LGHPLGCSGA RISTTLINLM ERKDAQFGLA TMCIGLGQGI ATVFERV
|
| |