Gene SeSA_A4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A4176 
Symboludp 
ID6516915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp4053245 
End bp4054006 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content56% 
IMG OID642749142 
Producturidine phosphorylase 
Protein accessionYP_002116894 
Protein GI194735544 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2820] Uridine phosphorylase 
TIGRFAM ID[TIGR01718] uridine phosphorylase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.82731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAGT CTGATGTTTT TCATCTCGGC CTCACCAAAA ACGATTTACA AGGGGCCCAG 
CTCGCCATCG TCCCTGGCGA TCCTGAGCGT GTGGAAAAGA TCGCCGCGCT GATGGATAAG 
CCGGTTAAGC TGGCATCTCA CCGCGAATTC ACCTCCTGGC GCGCTGAGCT GGATGGCAAA 
GCAGTTATCG TTTGCTCTAC CGGTATCGGC GGCCCGTCTA CTTCTATTGC CGTGGAAGAA 
CTGGCGCAAC TGGGTATTCG TACCTTCTTG CGTATCGGCA CCACGGGGGC TATTCAGCCG 
CACATCAACG TCGGCGACGT TCTGGTAACG ACCGCATCCG TACGTCTGGA TGGGGCGAGC 
CTGCATTTTG CGCCGATGGA ATTCCCGGCG GTTGCCGACT TTGCCTGCAC CACCGCGCTG 
GTTGAAGCCG CGAAATCGAT TGGCGCCACG ACTCACGTTG GCGTAACCGC CTCTTCCGAC 
ACTTTCTATC CGGGTCAGGA ACGTTACGAC ACCTATTCTG GCCGCGTTGT TCGTCGCTTC 
AAAGGTTCTA TGGAAGAGTG GCAGGCGATG GGCGTGATGA ACTACGAAAT GGAATCCGCT 
ACGCTGTTAA CCATGTGCGC AAGCCAGGGT TTACGCGCAG GTATGGTGGC GGGCGTTATC 
GTTAACCGTA CCCAACAAGA GATTCCGAAT GCGGAAACGA TGAAACAAAC TGAAAGCCAC 
GCGGTGAAAA TCGTCGTGGA AGCGGCCCGT CGTCTGCTGT AA
 
Protein sequence
MSKSDVFHLG LTKNDLQGAQ LAIVPGDPER VEKIAALMDK PVKLASHREF TSWRAELDGK 
AVIVCSTGIG GPSTSIAVEE LAQLGIRTFL RIGTTGAIQP HINVGDVLVT TASVRLDGAS 
LHFAPMEFPA VADFACTTAL VEAAKSIGAT THVGVTASSD TFYPGQERYD TYSGRVVRRF 
KGSMEEWQAM GVMNYEMESA TLLTMCASQG LRAGMVAGVI VNRTQQEIPN AETMKQTESH 
AVKIVVEAAR RLL