| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4126 |
|---|
| Symbol | rhlB |
|---|
| ID | 6519353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 4002087 |
|---|
| End bp | 4003352 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642749094 |
|---|
| Product | ATP-dependent RNA helicase RhlB |
|---|
| Protein accession | YP_002116850 |
|---|
| Protein GI | 194737374 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAA CACATTTAAC AGAACAGAAG TTTTCCGACT TCGCCCTGCA CCCACAGGTG
GTTGAAGCCC TTGAAAAAAA AGGGTTTTAT AATTGTACGC CCATTCAGGC ACTGGCCCTT
CCGCTAACGC TGGCGGGTCG TGACGTTGCA GGGCAGGCGC AAACCGGTAC CGGGAAAACG
ATGGCGTTTC TGACGTCAAC GTTTCATTAT TTACTTTCTC ATCCCGCGAT CGACGATCGC
AAGGTGAACC AGCCGCGCGC GCTGATCATG GCGCCGACGC GTGAATTAGC CGTACAAATT
CACGCAGACG CGGAGCCGTT GGCGCAAGCG ACAGGCTTAA AATTAGGCCT GGCTTACGGC
GGCGATGGTT ACGACAAGCA GCTTAAAGTG CTGGAAAGCG GCGTTGATAT TCTTATTGGT
ACGACGGGCC GACTGATCGA CTACGCCAAA CAAAACCACA TTAACCTCGG CGCCATTCAG
GTCGTCGTAC TCGATGAAGC CGATCGCATG TACGATTTGG GCTTTATTAA AGATATCCGC
TGGCTGTTCC GTCGTATGCC GCCGGCTGCG CAGCGTCTGA ACATGTTGTT CTCCGCCACC
CTGTCTTATC GGGTTCGCGA GCTGGCGTTT GAACAGATGA ACAACGCCGA ATATGTTGAA
GTGGAACCGG AGCAAAAGAC CGGCCACCGC ATTAAAGAAG AGCTTTTCTA CCCCTCTAAT
GAAGAGAAAA TGCGTTTACT GCAAACGCTG ATCGAAGAAG AGTGGCCGGA TCGCGCCATT
ATTTTCGCCA ACACCAAGCA TCGTTGCGAA GATATCTGGG GACATCTGGC GGCAGATGGT
CATCGTGTTG GTCTGCTGAC CGGTGACGTC GCGCAGAAAA AGCGCCTGCG GATTCTGGAT
GAGTTCACCC GCGGCGATCT GGATATTCTT GTGGCGACCG ATGTCGCGGC GCGCGGGTTG
CATATCCCCG CCGTAACGCA CGTCTTTAAC TACGATCTGC CAGATGATTG TGAAGACTAT
GTTCACCGTA TCGGTCGTAC CGGTCGCGCT GGCGCCAGCG GACATTCCAT CAGCCTGGCT
TGCGAAGAGT ATGCGCTGAA TCTGCCCGCC ATTGAGAGCT ATATCGGCCA CTCGATTCCG
GTCAGCAAAT ACAATCCGGA AGCGCTCATG AACGATCTGC CCAAGCCGTT GCGCCTGACG
CGTTCGCGTC CTGGCAATGG TCCGCGCCGC GCTGGCGCTC CGCGTAATCG TCGTCGTTCA
GGTTAA
|
|---|
| Protein sequence | MSKTHLTEQK FSDFALHPQV VEALEKKGFY NCTPIQALAL PLTLAGRDVA GQAQTGTGKT
MAFLTSTFHY LLSHPAIDDR KVNQPRALIM APTRELAVQI HADAEPLAQA TGLKLGLAYG
GDGYDKQLKV LESGVDILIG TTGRLIDYAK QNHINLGAIQ VVVLDEADRM YDLGFIKDIR
WLFRRMPPAA QRLNMLFSAT LSYRVRELAF EQMNNAEYVE VEPEQKTGHR IKEELFYPSN
EEKMRLLQTL IEEEWPDRAI IFANTKHRCE DIWGHLAADG HRVGLLTGDV AQKKRLRILD
EFTRGDLDIL VATDVAARGL HIPAVTHVFN YDLPDDCEDY VHRIGRTGRA GASGHSISLA
CEEYALNLPA IESYIGHSIP VSKYNPEALM NDLPKPLRLT RSRPGNGPRR AGAPRNRRRS
G
|
|---|
| |