| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A4069 |
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| Symbol | |
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| ID | 6517104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | + |
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| Start bp | 3943105 |
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| End bp | 3944895 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642749038 |
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| Product | HTH-type transcriptional regulator SgrR |
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| Protein accession | YP_002116800 |
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| Protein GI | 194735618 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTCATTC CCGTTCGGGA AATTTCACCT TTTATGACAA CCCGGCACAC TGAACAAAAA
TATTTAAAGC TACTCCAGCA CTATGGCGAC AAGCCTGTTA GCGTGACATT ACAGGAGCTG
GCGGATGTGT TGTTCTGCAC CCGGCGGCAT ATGCGTAATC TGTTGCTTCA GATGCAGGAG
GCAAAGTGGC TCATCTGGCA ATCACAGGCC GGACGTGGGC ATCGCGCCCG GCTTCACCTG
CGCTATAAAC CAGAACAGCT GTTAAGCGAA AAGGCGGAGC AGTTGCTGGA GTCTGGTCAT
GTTGATCAGG CCATTCAACT GCTGGGTAAA AATAAGCACC AGGTGGCGCA ACTGTTGCGT
TCAAAGCTGG GCTATAGCGT GCGGGCAGAC TATCAGCGGC TGTGCATCCC CTATTACCGG
ACAATGCCGT CGCTATGCCC CGGCATACCG TTGCGTCGCT CTGAGCAGCA TCTGGTCAGG
CAGATTTTTA GCGGCCTGAC GCGCATAAAT GAGGAAAAAG GTGAAATCGA AGCCGATCTT
GCCCACCACT GGCGGCAGAT TGATCCACTG CGCTGGCGTT TTTATCTGCG CCCCGCCGTC
CTCTGGCATG ATGGTCAGGA GCTGACGATC GACGCGGTTA TCGCTTCACT GACCCGCAGC
GCTAAGCTGC CGTTGTTCTC GCACTTGCAG ACCATTCAGG CCACCGGGCC GCTGAGTCTT
GAAATTACGC TGGCGCACCC GGATAACCGA CTGCCGCTGC TGCTCAGTCA TATTGATGCC
ATGATCCTAC CGCCTGATCA TACACAACGC GCTGATTTCC CGGCACATCC TGTGGGGACT
GGCCCTTATG AGGTGGTGGA AAACAATGGC TTTCATCTGC AAATGAAGGC CTTTGACCAC
TACTTTGGTC TGCGCGGGCT GCTGGATGAA GTGGAGGTCT TTATCTGGCC GAATTTAACG
GAGACAGACA ACCTGGCGGA ATCGCTGTCG GATAACGACA CGGCAGCCTG GCTCAGCTCC
AGCCTGAGCG ATGAGGATTA CGTTTCCGGA CGGCTTAGCC AGGTAGCGGG CAAACCTTCT
GACAACCTGC GCGAGATGTT TCTTGAGCGT GGAGGCTATT TTTTATTATG CGACAGCCGC
TCCCCGCACT GGCATACCGC CGAACATCGC CGCTGGCTGC GGGAAACACT CAGCCCTTAC
GCCATACTCC AGCATCTGAG TGAGGCAATT CGCCCCTTCT GGGTACCGGG CGGCAGCCTG
CTGTCCTCCT GGTTTCATAC TATTGAGGCG GGCCCGGCCT GTTCACCTTT TATCTCGTCG
TCGCCCTACG CGAAACTGCG TCTGGCCTAT CACGATCAGC ACCCTGAATT TCCAATGCTT
CTGGATATCA TGCAAAAGAT CATGCGCCAG CAGGGCATTT TACTTGAGGG CGTTGCACTG
AATTATGATG ACTGGGCAAG CGGCAAGGCC GAGGTTGATC TCTGGCTGGG GACAGTTAAT
TTCCCCATTC CCGAAGAGTG GAACGTCGGT ACATGGCTGC TGGGCTCCCC TTTACTGCGC
CACGCCATCA GCGGTGGGGA TGATGCGCTG CTGGCCCAAT GGGAAACCCA GTGGCATGCC
GAAACCATCA GCGCGGAACA ACTGGTCAGG GAAACCACCC GTTCAGGCTG GCTACAACCG
CTTTTTCACC ACTGGATGCG ACTCAAAGGC CCCGACCGGG CCAGGGGGAT CCACCTGAAT
AACCTGGGGT GGTTTGATTT CCGATCCACC TGGATTGAGC CAGGGCCTTA A
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| Protein sequence | MLIPVREISP FMTTRHTEQK YLKLLQHYGD KPVSVTLQEL ADVLFCTRRH MRNLLLQMQE
AKWLIWQSQA GRGHRARLHL RYKPEQLLSE KAEQLLESGH VDQAIQLLGK NKHQVAQLLR
SKLGYSVRAD YQRLCIPYYR TMPSLCPGIP LRRSEQHLVR QIFSGLTRIN EEKGEIEADL
AHHWRQIDPL RWRFYLRPAV LWHDGQELTI DAVIASLTRS AKLPLFSHLQ TIQATGPLSL
EITLAHPDNR LPLLLSHIDA MILPPDHTQR ADFPAHPVGT GPYEVVENNG FHLQMKAFDH
YFGLRGLLDE VEVFIWPNLT ETDNLAESLS DNDTAAWLSS SLSDEDYVSG RLSQVAGKPS
DNLREMFLER GGYFLLCDSR SPHWHTAEHR RWLRETLSPY AILQHLSEAI RPFWVPGGSL
LSSWFHTIEA GPACSPFISS SPYAKLRLAY HDQHPEFPML LDIMQKIMRQ QGILLEGVAL
NYDDWASGKA EVDLWLGTVN FPIPEEWNVG TWLLGSPLLR HAISGGDDAL LAQWETQWHA
ETISAEQLVR ETTRSGWLQP LFHHWMRLKG PDRARGIHLN NLGWFDFRST WIEPGP
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