| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A3992 |
|---|
| Symbol | |
|---|
| ID | 6515320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 3863941 |
|---|
| End bp | 3865299 |
|---|
| Gene Length | 1359 bp |
|---|
| Protein Length | 452 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 642748963 |
|---|
| Product | PTS system, galactitol-specific IIC component |
|---|
| Protein accession | YP_002116725 |
|---|
| Protein GI | 194736890 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3775] Phosphotransferase system, galactitol-specific IIC component |
|---|
| TIGRFAM ID | [TIGR00827] PTS system, galactitol-specific IIC component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.6918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.82636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGATA TAGCACATAC TCTCTATACC GTTGTGCAAT ATGTCCTGGG ATTTGGCCCA
ACGGTTTTAT TGCCGCTGGT CCTTTTTTTC CTGGCATTGT TCTTCAAAGT AAAACCCGCT
AAAGCACTTC GCTCATCGTT AATTGTCGGA ATAGGGTTTG TCGGAATTTA TGCCATCTTT
GACATACTTA CCAGCAACGT AGGCCCGGCT GCACAGGCAA TGGTTGAGCG AACTGGTATT
AGTCTGCCTG TGGTCGATTT AGGCTGGCCA CCGTTGGCCG CAATTACCTG GGGCTCACCA
ATCGCACCCT TTGTCATTCC GCTGACGATG CTGATTAATG TCGCCATGCT GGCTCTGAAT
AAGACACGTA CTGTTGATGT CGACATGTGG AACTACTGGC ACTTTGCCCT GGCTGGAACG
CTGGTTTACT ACAGCACAGG GAGTTTTGTT TTGGGTCTGT CCGCAGCCGC TATTGCCGCG
ATCGTGGTTC TCAAACTGGC GGACTGGTCT GCGCCATTAG TGGCAAAGTA CTTCGGTCTG
GAAGGTATTT CACTTCCGAC CCTGTCATCT GTCGTCTTCT TTCCGATTGG ATTGCTGTTC
GACAAAATTA TCGACAAAAT CCCTGGCGTT AACCGTATTC ATATTGATCC GGAAAACGTT
CAGAAAAAAA TGGGAATCTT CGGTGAGCCT ATGATGGTGG GTACTATTCT GGGGGTCTTG
TTGGGCATCA TTGCCGGGTA TGACTTTAAA CATATCCTAT TGCTGGGGAT CAGCATTGGC
GGTGTCATGT TCATTCTTCC GCGTATGGTA CGAATTTTGA TGGAAGGTTT ATTACCTCTG
TCTGAAGCCA TTAAGAAATA TTTGAATGCC AAATATCCTG GCCGTGATGA TCTCTTTATC
GGACTGGATA TCGCGGTAGC AGTAGGTAAC CCAGCCATTA TATCTACAGC ACTGATTCTG
ACACCCATCT CTGTCTTTAT TGCATTCCTT CTTCCTGGCA ATAAAGTCCT GCCACTCGGA
GACCTTGCGA ACCTGGCAGT CATGGCTTCC ATGATTGTAC TGGCATGTCG TGGCAATATT
TTCCGGGCTG TGATAACCGC AATTCCTGTT ATTGTCGCCG ACTTGTGGAT TGCGACCAAA
ATTGCGCCAT TTATTACCAG TATGGCTAAG GATGTCAATT TCAAAATGGC TGAGGGGTCA
AGTGGTCAGG TATCAAGCTT CCTTGATGGC GGTAACCCCT TCCGTTTCTG GCTGCTTGAA
ATATTCAACG GAAATATTAT TGCTATCGGG CTGATTCCTG TGCTTGCGCT GATTATTTAT
GGTGTTTTTC GCCTGACAAA AGGAACGGTC TATGCCTGA
|
|---|
| Protein sequence | MNDIAHTLYT VVQYVLGFGP TVLLPLVLFF LALFFKVKPA KALRSSLIVG IGFVGIYAIF
DILTSNVGPA AQAMVERTGI SLPVVDLGWP PLAAITWGSP IAPFVIPLTM LINVAMLALN
KTRTVDVDMW NYWHFALAGT LVYYSTGSFV LGLSAAAIAA IVVLKLADWS APLVAKYFGL
EGISLPTLSS VVFFPIGLLF DKIIDKIPGV NRIHIDPENV QKKMGIFGEP MMVGTILGVL
LGIIAGYDFK HILLLGISIG GVMFILPRMV RILMEGLLPL SEAIKKYLNA KYPGRDDLFI
GLDIAVAVGN PAIISTALIL TPISVFIAFL LPGNKVLPLG DLANLAVMAS MIVLACRGNI
FRAVITAIPV IVADLWIATK IAPFITSMAK DVNFKMAEGS SGQVSSFLDG GNPFRFWLLE
IFNGNIIAIG LIPVLALIIY GVFRLTKGTV YA
|
|---|
| |