Gene SeSA_A3887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3887 
SymbolmtlR 
ID6517023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3758023 
End bp3758613 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content54% 
IMG OID642748860 
Productmannitol repressor protein 
Protein accessionYP_002116623 
Protein GI194735117 
COG category[K] Transcription 
COG ID[COG3722] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA ACCCGGCGCA GGTTAGCCTG CGCCCAAATA ACAGATTGTC AGATATGCAG 
GCAATAATGG AACAAACCCA GGCCTTTGAA AATCGTGTGC TTGAGCGTCT GAATGCTGGC 
AAAACCGTAC GGAGCTTCCT GATTACTGCC GTCGAGTTAT TGACCGAGGC GGTGAATATT 
CTGGTGCTCC AGGTGTTTCG CAAAGACGAC TATGCGGTGA AATACGCTGT GGAACCGTTG 
CTGGACGGCG ACGGACCGCT GGGCGATCTT TCGGTACGTC TGAAACTTAT CTATGGCCTG 
GGCGTACTCA GCCGCACCGA ATATGAAGAT GCGGAGCTGT TAATGGCGCT GCGCGAAGAG 
CTGAATCACG ACGGCAATGA GTACGCCTTT ACCGACGATG AAATCCTCGG GCCGTTTGGC 
GAACTACACT GCGTCATGGC GCTGCCGCCG CCGCCGCATT TTGATACGTC CGACGCGGCG 
CTCTACGCCA TGCAAATTCA GCGCTACCAG CAGGCGGTGC GTTCGACGAT GGTTCTCTCC 
CTGACCGAGC TGATTTCTAA AATCAGCTTA AAAAAGGCCT TTCAAAAGTA A
 
Protein sequence
MTQNPAQVSL RPNNRLSDMQ AIMEQTQAFE NRVLERLNAG KTVRSFLITA VELLTEAVNI 
LVLQVFRKDD YAVKYAVEPL LDGDGPLGDL SVRLKLIYGL GVLSRTEYED AELLMALREE 
LNHDGNEYAF TDDEILGPFG ELHCVMALPP PPHFDTSDAA LYAMQIQRYQ QAVRSTMVLS 
LTELISKISL KKAFQK