Gene SeSA_A3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3748 
Symbol 
ID6519597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3610618 
End bp3611934 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content53% 
IMG OID642748727 
Productglycerol-3-phosphate transporter periplasmic binding protein 
Protein accessionYP_002116491 
Protein GI194734216 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCGT TACGACATAC AGCTTTAGGA CTGGCGCTGA GTCTGGCATT TACGGGTCAG 
GCGTTGGCCG TCACCACTAT TCCATTCTGG CATTCAATGG AAGGGGAGTT AGGCAAAGAA
GTTGATTCAC TGGCGCAACG TTTCAACCAG GCCAATCCGG ATTACAAAAT CGTTCCGGTC
TATAAGGGGA ACTATGAACA GAACCTGAGC GCCGGGATCG CGGCATTCCG TACCGGCAAC
GCGCCGGCAA TATTGCAGGT TTATGAGGTT GGGACGGCGA CCATGATGGC CTCGAAAGCC
ATTAAGTCGG TTTATGAAGT GTTTAAAGAC GCCGGTATTA ACTTTGACGA GTCCCAGTTT
GTACCGACCG TTGCAGGCTA CTACACCGAT GCTAAAAGCG GGCATCTGCT CTCCCAGCCC
TTTAACAGCT CCACGCCGGT ACTGTACTAC AACAAAGACG CCTTTAAGAA AGCCGGTTTA
GATCCGGAGC AGCCGCCGAA AACCTGGCAG GAGCTGGCTG ACTATACCGC GAAACTGAGA
GCGGCAGGCA TGAAATGCGG TTACGCCAGC GGCTGGCAAG GTTGGATCCA ACTGGAAAAC
TTCAGCGCCT GGAACGGTCT CCCCTTCGCC AGTAAAAACA ATGGTTTTGA CGGTACAGAT
GCGGTGCTGG AGTTTAATAA GCCAGAGCAG GTGAAACATA TCGCGCTGCT GGAAGAGATG
AATAAAAAAG GCGATTTTAG CTATGTTGGG CGTAAGGACG AGTCTACCGA GAAGTTTTAT
AACGGTGACT GCGCGATGAC AACCGCGTCC TCCGGCTCGC TCGCCAATAT CCGCCAGTAT
GCCAAATTTA ACTATGGCGT GGGTATGATG CCGTACGACG CGGATATCAA GGGCGCGCCG
CAAAACGCTA TTATCGGCGG AGCCAGCCTA TGGGTCATGC AGGGTAAAGA TAAAGAAACC
TATACCGGCG TCGCCAAATT CCTCGACTTC CTGGCAAAAC CGGAAAACGC TGCTGAATGG
CATCAAAAAA CTGGCTACCT GCCGATTACC ACCGCCGCCT ACGAGCTGAC CCGCGAGCAG
GGTTATTACG ATAAAAACCC CGGTGCGGAT ATCGCCACTC GCCAGATGTT GAATAAGCCG
CCGTTACCCT TCACCAAAGG CTTGCGTCTG GGCAATATGC CGCAGATTCG TACCATCGTG
GACGAAGAGC TGGAAAGCGT CTGGACCGGG AAGAAGACCC CACAACAGGC GTTGGATACC
GCAGTGGAGC GCGGGAATCA GTTGCTGCGT CGTTTTGAGA AAGCGAGCAA ATCTTAA
 
Protein sequence
MISLRHTALG LALSLAFTGQ ALAVTTIPFW HSMEGELGKE VDSLAQRFNQ ANPDYKIVPV 
YKGNYEQNLS AGIAAFRTGN APAILQVYEV GTATMMASKA IKSVYEVFKD AGINFDESQF
VPTVAGYYTD AKSGHLLSQP FNSSTPVLYY NKDAFKKAGL DPEQPPKTWQ ELADYTAKLR
AAGMKCGYAS GWQGWIQLEN FSAWNGLPFA SKNNGFDGTD AVLEFNKPEQ VKHIALLEEM
NKKGDFSYVG RKDESTEKFY NGDCAMTTAS SGSLANIRQY AKFNYGVGMM PYDADIKGAP
QNAIIGGASL WVMQGKDKET YTGVAKFLDF LAKPENAAEW HQKTGYLPIT TAAYELTREQ
GYYDKNPGAD IATRQMLNKP PLPFTKGLRL GNMPQIRTIV DEELESVWTG KKTPQQALDT
AVERGNQLLR RFEKASKS