Gene SeSA_A3670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3670 
Symbol 
ID6516363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp3519843 
End bp3521024 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content55% 
IMG OID642748652 
Producthypothetical protein 
Protein accessionYP_002116416 
Protein GI194735359 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.263395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAACA GCAACCGCAT CAAGCTCACA TGGATCAGCT TTCTTTCCTA CGCCCTGACC 
GGGGCGCTGG TGATTGTCAC CGGGATGGTG ATGGGAAATA TCGCAGACTA TTTTCAGCTG 
CCCGTTTCCA GCATGAGTAA TACCTTTACT TTCCTGAACG CCGGGATTTT GATCTCGATC 
TTCCTCAATG CGTGGCTGAT GGAAATCATC CCGCTGAAAA CACAGCTACG CTTTGGTTTT 
ATCCTGATGG TGCTGGCGGT GGCCGGGCTG ATGTTCAGCC ACAGCCTGGC GTTGTTCTCA 
GCGGCGATGT TTGTGCTGGG GCTGGTCAGC GGGATCACCA TGTCGATTGG CACCTTCCTG 
ATTACGCAAC TGTATGAAGG GCGTCAGCGC GGTTCCCGAC TGCTGTTTAC CGACTCCTTC 
TTCAGCATGG CGGGGATGAT TTTTCCTATG GTCGCCGCCT TCCTGCTGGC GCGTAGTATT 
GAGTGGTACT GGGTCTACGC CTGCATCGGC CTGGTCTACC TGGCGATTTT TATCCTGACC 
TTCGGCTGTG AATTTCCGGC GCTGGGTAAA CATGCGCAGC ACTCTCAGGC GCCTGTCGCC 
AAAGAAAAAT GGGGCATTGG CGTACTGTTT CTCGCCGTCG CCGCGCTGTG CTATATCCTC 
GGTCAATTGG GCTTTATCTC CTGGGTGCCG GAATATGCCA AAGGCCTCGG CATGAGCCTG 
AATGACGCCG GGGCGCTGGT GAGTGATTTC TGGATGTCCT ATATGTTTGG TATGTGGGCG 
TTCAGCTTTA TCCTGCGCTT TTTCGATCTG CAACGCATCC TGACCGTACT GGCGGGTATA 
GCGGCGGTCC TGATGTATCT GTTTATTACC GGCACGCAGG CGCATATGCC GTGGTTTATT 
CTGACGCTGG GCTTCTTCTC CAGCGCCATT TATACCTCCA TCATTACGCT GGGATCGCAG 
CAAACGAAAG TGGCCTCGCC TAAGCTGGTT AACTTTATTC TGACCTGCGG CACCATCGGA 
ACGATGCTGA CCTTCGTCGT CACCGGCCCG ATTGTGGCGC ACAGCGGTCC ACAGGCGGCG 
TTACTCACCG CGAATGGTCT GTATGCGGTG GTCTTTGTGA TGTGCTTTGC GCTCGGCTTT 
GTATCCCGTC ATCGTCAGCA TAGTTCGCCA GCGGCGCATT GA
 
Protein sequence
MTNSNRIKLT WISFLSYALT GALVIVTGMV MGNIADYFQL PVSSMSNTFT FLNAGILISI 
FLNAWLMEII PLKTQLRFGF ILMVLAVAGL MFSHSLALFS AAMFVLGLVS GITMSIGTFL 
ITQLYEGRQR GSRLLFTDSF FSMAGMIFPM VAAFLLARSI EWYWVYACIG LVYLAIFILT 
FGCEFPALGK HAQHSQAPVA KEKWGIGVLF LAVAALCYIL GQLGFISWVP EYAKGLGMSL 
NDAGALVSDF WMSYMFGMWA FSFILRFFDL QRILTVLAGI AAVLMYLFIT GTQAHMPWFI 
LTLGFFSSAI YTSIITLGSQ QTKVASPKLV NFILTCGTIG TMLTFVVTGP IVAHSGPQAA 
LLTANGLYAV VFVMCFALGF VSRHRQHSSP AAH