Gene SeSA_A3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3560 
SymboltldD 
ID6519103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3432551 
End bp3433996 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content57% 
IMG OID642748546 
Productprotease TldD 
Protein accessionYP_002116316 
Protein GI194735975 
COG category[R] General function prediction only 
COG ID[COG0312] Predicted Zn-dependent proteases and their inactivated homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCTGA ACCTGGTAAG TGAACAATTG CTAGCGGCGA ATGGCCTGAA CCATCAGGAT 
CTGTTCGCTA TTTTGGGCCA ACTGGCCGAA CGCCGTCTTG ATTATGGCGA CCTCTATTTT 
CAGTCGAGCT ATCACGAATC CTGGGTTTTA GAAGACCGCA TCATTAAAGA TGGTTCATAT 
AATATCGACC AGGGCGTTGG CGTTCGCGCC ATTAGCGGCG AAAAAACCGG TTTTGCTTAT 
GCTGACCAGA TAAGCCTCCT GGCGCTGGAG CAGAGTGCGC AGGCAGCGCG AACCATTGTA 
CGCGAGAACG GTGAAGGCAA GGTAAAAACG CTCGCCGCCG TAGCGCATCA GCCGCTCTAC 
ACCACCCTTG ATCCGCTGCA AAGTATGAGC CGCGAAGAGA AGCTGGATAT CCTCAGACGC 
GTTGATAAAG CGGCGCGAGA AGCCGATAAA CGCGTGCAGG AAGTTAACGC CAGCCTGACC 
GGCGTATATG AATTAATCCT CGTGGCGGCG ACCGACGGGA CGCTGGCGGC GGATGTCCGT 
CCACTGGTGC GGTTGTCCGT TAGCGTGCAG GTGGAAGAAG ACGGTAAACG CGAGCGCGGC 
GCCAGCGGCG GCGGCGGTCG CTTTGGTTAT GAGTATTTTC TTGCCGATCT CGACGGCGAG 
GTTCGCGCCG ACGCGTGGGC GAAAGAAGCG GTACGCATGG CGCTGGTTAA TCTCTCCGCG 
GTCGCTGCGC CAGCGGGGAC GTTACCGGTG GTTCTGGGCG CCGGGTGGCC GGGCGTATTG 
CTGCACGAAG CGGTCGGGCA CGGGCTGGAA GGTGATTTTA ACCGTCGTGG GACGTCTGTG 
TTTAGCGGTC AGATCGGCGA GCAGGTTGCC TCCGCGCTTT GCACCGTAGT GGATGACGGC 
ACAATGATGA ACCGTCGTGG CTCCGTTGCT ATCGATGATG AAGGTACGCC AGGCCAGTAC 
AACGTATTGA TTGAAAATGG CGTGCTGAAA GGATACATGC AGGACAAGCT GAACGCGCGC 
CTGATGGGCG CTGCGCCGAC CGGTAACGGG CGTCGCGAAT CTTATGCGCA TCTGCCGATG 
CCGCGTATGA CGAATACCTA TATGTTGGCG GGGCAGTCAA CGCCGCAGGA AATTATCGAA 
TCCGTTGAGT ACGGCATCTA TGCGCCTAAC TTTGGCGGCG GTCAGGTGGA TATCACCTCC 
GGCAAGTTTG TGTTCTCTAC CTCGGAAGCG TATCTGATTG AAAACGGCAA AGTCACGACG 
CCGGTGAAGG GCGCGACGTT GATTGGATCA GGCATTGAAA CGATGCAACA GATCTCCATG 
GTCGGCAACG ACCTTAAGCT GGATAACGGG GTGGGGGTCT GCGGTAAAGA GGGTCAAAGT 
CTGCCGGTAG GCGTAGGCCA GCCGACGCTG AAAGTCGATA ACCTGACGGT TGGCGGCACC 
GCATAA
 
Protein sequence
MSLNLVSEQL LAANGLNHQD LFAILGQLAE RRLDYGDLYF QSSYHESWVL EDRIIKDGSY 
NIDQGVGVRA ISGEKTGFAY ADQISLLALE QSAQAARTIV RENGEGKVKT LAAVAHQPLY 
TTLDPLQSMS REEKLDILRR VDKAAREADK RVQEVNASLT GVYELILVAA TDGTLAADVR 
PLVRLSVSVQ VEEDGKRERG ASGGGGRFGY EYFLADLDGE VRADAWAKEA VRMALVNLSA 
VAAPAGTLPV VLGAGWPGVL LHEAVGHGLE GDFNRRGTSV FSGQIGEQVA SALCTVVDDG 
TMMNRRGSVA IDDEGTPGQY NVLIENGVLK GYMQDKLNAR LMGAAPTGNG RRESYAHLPM 
PRMTNTYMLA GQSTPQEIIE SVEYGIYAPN FGGGQVDITS GKFVFSTSEA YLIENGKVTT 
PVKGATLIGS GIETMQQISM VGNDLKLDNG VGVCGKEGQS LPVGVGQPTL KVDNLTVGGT 
A