Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3441 |
Symbol | garR |
ID | 6518122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3323652 |
End bp | 3324542 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642748432 |
Product | tartronate semialdehyde reductase |
Protein accession | YP_002116204 |
Protein GI | 194734463 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
TIGRFAM ID | [TIGR01505] 2-hydroxy-3-oxopropionate reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGA AAGTTGGCTT TATTGGCTTA GGCATCATGG GTAAGCCCAT GAGCAAAAAC TTACTGAAAG CAGGGTATTC GCTGGTGGTG TCCGATCGTA ATCCTGAAGC GATTGCCGAC GTCATTGCCG CAGGCGCGGA AACGGCCTCT ACGGCGAAGG CGATCGCTGA ACAGTGTGAC GTCATCATCA CGATGCTGCC TAACTCTCCG CATGTGAAAG AAGTTGCGCT GGGCGAGAAC GGTATCATCG AAGGCGCGAA GCCGGGAACC GTATTGATTG ATATGAGTTC TATCGCGCCG CTGGCAAGCC GTGAAATCAG CGATGCGCTG AAGGCGAAGG GCGTTGAGAT GTTGGATGCG CCGGTCAGCG GCGGCGAGCC GAAGGCGATT GATGGCACGC TGTCGGTGAT GGTGGGGGGC GATAAAGCCA TTTTCGACAA GTACTACGAC CTGATGAAAG CGATGGCGGG TTCCGTGGTG CATACCGGCG ATATCGGCGC AGGCAACGTC ACAAAACTGG CTAACCAGGT GATCGTGGCG TTGAATATCG CCGCCATGTC TGAAGCGCTG ACGCTGGCGA CTAAAGCGGG CGTCAACCCG GATCTGGTCT ATCAGGCGAT TCGCGGCGGT CTGGCTGGCA GCACGGTACT GGATGCGAAA GCGCCGATGG TCATGGACCG AAACTTTAAG CCAGGTTTCC GTATCGATCT GCACATTAAA GATCTGGCGA ATGCGCTGGA TACCTCCCAC GGCGTTGGCG CGCAGCTCCC GCTGACCGCC GCCGTTATGG AAATGATGCA GGCGTTACGC GCGGATGGAC ACGGTAATGA CGACCATAGC GCGCTGGCGT GCTACTACGA AAAACTGGCG AAAGTGGAAG TCACTCGCTA A
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Protein sequence | MTMKVGFIGL GIMGKPMSKN LLKAGYSLVV SDRNPEAIAD VIAAGAETAS TAKAIAEQCD VIITMLPNSP HVKEVALGEN GIIEGAKPGT VLIDMSSIAP LASREISDAL KAKGVEMLDA PVSGGEPKAI DGTLSVMVGG DKAIFDKYYD LMKAMAGSVV HTGDIGAGNV TKLANQVIVA LNIAAMSEAL TLATKAGVNP DLVYQAIRGG LAGSTVLDAK APMVMDRNFK PGFRIDLHIK DLANALDTSH GVGAQLPLTA AVMEMMQALR ADGHGNDDHS ALACYYEKLA KVEVTR
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