Gene SeSA_A3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3342 
SymbolexbB 
ID6518167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp3225389 
End bp3226123 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content55% 
IMG OID642748342 
Productbiopolymer transport protein ExbB 
Protein accessionYP_002116115 
Protein GI194733979 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.677738 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGTAATA ATTTGATGCA GACGGATCTC TCCGTCTGGG GTATGTATCA GCACGCCGAT 
ATTGTCGTGA AGTGCGTGAT GATTGGTCTG ATTCTGGCGT CAGTCGTCAC CTGGGCTATC
TTCTTCAGTA AAAGTGTTGA ATTTTTCACT CAAAAGCGCC GCTTAAAGCG CGAACAACTG
CAATTAGCCG ATGCGCGCTC TTTAGATCAG GCTTCTGACA TTGCGGCAGG TTTCAGCGCA
AAAAGCCTCA GCGCACAGCT CATCAATGAA GCGCAGAATG AACTGGAACT CTCTCAGGGC
AGCGAAGATA ACGAAGGGAT TAAAGAACGT ACCGGCTTCC GTCTGGAACG TCGCGTCGCT
GCGGTTGGCC GCTACATGGG ACGAGGCAAC GGTTATCTGG CGACGATCGG CGCCATTTCC
CCCTTCGTCG GGTTGTTTGG CACCGTATGG GGCATTATGA ATAGCTTCAT CGGTATTGCG
CAAACGCAGA CCACCAACCT GGCGGTGGTT GCTCCTGGTA TTGCGGAAGC GCTGCTGGCG
ACGGCGATTG GGCTGGTAGC CGCGATCCCG GCGGTCGTCA TTTACAACAT CTTCGCACGT
CAGATAGGCA GTTACAAAGC AACGCTGGGC GACGTGGCGG CGCAGGTATT GCTGCTGCAA
AGCCGCGATC TCGATCTGAA TGCGAGCGCC AGTGCGCAGC CGGTACGCGC CGCGCAGAAA
TTACGGGTAG GGTAA
 
Protein sequence
MGNNLMQTDL SVWGMYQHAD IVVKCVMIGL ILASVVTWAI FFSKSVEFFT QKRRLKREQL 
QLADARSLDQ ASDIAAGFSA KSLSAQLINE AQNELELSQG SEDNEGIKER TGFRLERRVA
AVGRYMGRGN GYLATIGAIS PFVGLFGTVW GIMNSFIGIA QTQTTNLAVV APGIAEALLA
TAIGLVAAIP AVVIYNIFAR QIGSYKATLG DVAAQVLLLQ SRDLDLNASA SAQPVRAAQK
LRVG