Gene SeSA_A3239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3239 
Symbol 
ID6516750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp3130027 
End bp3130662 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content56% 
IMG OID642748240 
Productarginine exporter protein 
Protein accessionYP_002116014 
Protein GI194735998 
COG category[R] General function prediction only 
COG ID[COG1279] Lysine efflux permease 
TIGRFAM ID[TIGR00948] L-lysine exporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATATCTT ATTATTTTCA AGGGCTTGCC CTTGGCGCCG CCATGATCCT TCCGCTTGGC 
CCGCAAAATG CGTTTGTGAT GAATCAGGGA ATTCGTCGCC AGTACCACCT CATGATAGCG 
CTGCTTTGCG CGTTAAGTGA TTTAGTCCTG ATCAGCGCCG GTATTTTTGG CGGCAGCGCG 
TTGCTGATGC AGTCGCCGTG GCTGCTGGCG CTGGTCACAT GGGGCGGGGT CGCGTTCTTG 
TTATGGTACG GTTTTGGCGC GCTGAAAACG GCAATGAGCA GTAATCTGGA GCTGGCCAGC 
GCCGAGGTTA TGAAGCAGGG GCGCTGGAAA ATTATTGCTA CGATGCTGGC GGTAACGTGG 
CTGAATCCGC ACGTTTATCT GGATACGTTT GTCGTGTTGG GCAGTCTCGG CGGGCAACTG 
GCTATGGAGC CAAAGCGCTG GTTTGCTCTC GGCACGATTA GCGCGTCGTT CTTATGGTTT 
TTTGGGTTAG CGCTACTGGC GGCCTGGCTT GCGCCTCGAC TGCGTACGGC GAAAGCTCAA 
CGCATTATCA ACATTCTGGT TGGGGTGGTG ATGTGGCTTA TCGCCTTCCA ACTGGCGCGG 
GAAGGCGTCG CGCATATGCA CGCGCTTTTC AACTAA
 
Protein sequence
MISYYFQGLA LGAAMILPLG PQNAFVMNQG IRRQYHLMIA LLCALSDLVL ISAGIFGGSA 
LLMQSPWLLA LVTWGGVAFL LWYGFGALKT AMSSNLELAS AEVMKQGRWK IIATMLAVTW 
LNPHVYLDTF VVLGSLGGQL AMEPKRWFAL GTISASFLWF FGLALLAAWL APRLRTAKAQ 
RIINILVGVV MWLIAFQLAR EGVAHMHALF N