Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A3184 |
Symbol | |
ID | 6516520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 3080078 |
End bp | 3081496 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642748193 |
Product | L-arabinose/proton symport protein |
Protein accession | YP_002115968 |
Protein GI | 194735530 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCTA TTAATCATGA CTCTGCTTTA ACGCCGCGTT CGCTTCGCGA CACACGACGT ATGAATATGT TTGTTTCGGT TTCTGCAGCG GTAGCGGGAC TGTTATTTGG TCTGGATATC GGCGTTATCG CCGGGGCGCT GCCTTTTATT ACCGACCATT TCGTACTGAC CAGCCGGCTG CAGGAATGGG TCGTCAGCAG TATGATGCTT GGCGCGGCAA TTGGCGCATT ATTTAACGGT TGGCTTTCAT TCCGGCTGGG GCGTAAGTAT AGCCTGATGG CCGGCGCGAT TTTGTTTGTG CTCGGCTCGC TGGGGTCGGC GTTTGCTTCC AGCGTGGAAG TATTGATTGG CGCCCGCGTG ATACTGGGCG TAGCAGTAGG GATTGCCTCC TATACCGCGC CGCTTTATCT CTCTGAAATG GCAAGTGAAA ATGTTCGCGG CAAAATGATC AGTATGTATC AACTGATGGT GACGTTAGGC ATTGTGCTGG CTTTTTTATC CGATACGGCA TTCAGCTACA GCGGCAACTG GCGCGCGATG TTGGGCGTAC TGGCGCTGCC TGCGGTGTTG CTCATTATTC TGGTGGTATT CCTGCCGAAT AGTCCGCGCT GGCTGGCGCA AAAAGGTCGC CATATTGAAG CGGAAGAGGT GCTGCGTATG CTGCGCGATA CCTCGGAAAA AGCCCGTGAT GAACTGAATG AGATTCGGGA AAGCCTCAAA CTCAAGCAGG GCGGGTGGGC ATTATTTAAA GCTAACCGCA ATGTTCGCCG CGCCGTGTTC CTCGGTATGC TGCTACAGGC AATGCAGCAG TTCACCGGCA TGAACATCAT TATGTACTAT GCGCCGCGCA TTTTTAAAAT GGCCGGCTTT ACCACCACGG AACAGCAAAT GATCGCTACG CTGGTGGTCG GACTGACCTT TATGTTCGCG ACGTTTATCG CCGTCTTTAC GGTAGATAAG GCCGGGCGTA AACCGGCGTT AAAAATCGGT TTCAGCGTAA TGGCGTTAGG GACATTGGTG TTGGGCTACT GCCTGATGCA GTTTGATAAC GGTACGGCAT CAAGCGGCCT CTCCTGGCTT TCCGTTGGGA TGACGATGAT GTGTATCGCC GGTTACGCGA TGAGCGCCGC TCCGGTGGTG TGGATACTGT GTTCGGAAAT CCAGCCGCTG AAATGCCGTG ATTTTGGCAT TACCTGTTCA ACCACGACAA ACTGGGTATC GAACATGATC ATCGGCGCGA CATTCCTGAC ACTGTTGGAC AGCATTGGCG CGGCAGGTAC ATTCTGGCTT TACACCGCGC TGAATATCGC TTTTATCGGC ATCACTTTCT GGCTGATTCC GGAAACCAAA AATGTCACCC TGGAGCACAT CGAACGCAAG CTGATGGCGG GCGAGAAGCT AAGAAATATT GGCGTGTAA
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Protein sequence | MVSINHDSAL TPRSLRDTRR MNMFVSVSAA VAGLLFGLDI GVIAGALPFI TDHFVLTSRL QEWVVSSMML GAAIGALFNG WLSFRLGRKY SLMAGAILFV LGSLGSAFAS SVEVLIGARV ILGVAVGIAS YTAPLYLSEM ASENVRGKMI SMYQLMVTLG IVLAFLSDTA FSYSGNWRAM LGVLALPAVL LIILVVFLPN SPRWLAQKGR HIEAEEVLRM LRDTSEKARD ELNEIRESLK LKQGGWALFK ANRNVRRAVF LGMLLQAMQQ FTGMNIIMYY APRIFKMAGF TTTEQQMIAT LVVGLTFMFA TFIAVFTVDK AGRKPALKIG FSVMALGTLV LGYCLMQFDN GTASSGLSWL SVGMTMMCIA GYAMSAAPVV WILCSEIQPL KCRDFGITCS TTTNWVSNMI IGATFLTLLD SIGAAGTFWL YTALNIAFIG ITFWLIPETK NVTLEHIERK LMAGEKLRNI GV
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