Gene SeSA_A3065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A3065 
Symbol 
ID6519542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2963369 
End bp2964145 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content58% 
IMG OID642748087 
Producthypothetical protein 
Protein accessionYP_002115864 
Protein GI194734881 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3622] Hydroxypyruvate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.765519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.510591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGTT TTGCCGCCAA TTTGTCGATG ATGTTTACCG AAGTGCCGTT TACCGAGCGT 
TTTGCCGCCG CTGCCGAAGC CGGTTTTCAG GCCGTTGAGT TTCTGTTCCC CTACGGCTTT 
GCCGCCAGCG AGATTAAAGC CAAGCTATCG CGTCATGATC TGACGCTGGC GCTGTTTAAT 
ACTTCGGCGG GCGATACCGC GGCGGGCGAG TGGGGACGTG CCGCGCTACC GGGGCGCGAA 
CACGACGCGC GCGCCGATAT CGATCTGGCT CTGGAATACG CTCTGGCGCT GGAATGCGAG 
CAGGTTCACA TCATGGCGGG CGTCGTGCCG GATGGCGCTG ATGGCGCACG TTATCGCGCC 
ACGTTTATCG ATAATTTGCG TTATGCCGCC GACCGGTTTG CCGCCCACGA TAAACGTATT 
TTGATCGAAG CGCTGAGTCC CGGCGTTAAA CCCGGCTACC TCTTTTCCAG CCAATATCAG 
GCGCTGGGCA TCGCAGAAGA GGTTGACCGC CCGAATGTGT TCATCCAGCT CGACACTTTC 
CACGCACAAA AAGTGGATGG CAATTTGAGT CACCTGATTC GCGAGTACGC GGGCCGCTAT 
GCCCATGTAC AAATCGCCTC GCTACCGGAC AGACATGAAC CGGATGATGG CGAGATCAAC 
TACCCATGGC TGTTCCGGCT GTTCGATGAC GTAGGTTATC GCGGCTGGAT AGGCTGCGAA 
TACCAACCAC GGAATACCAC GCAGGACGGG CTTGGCTGGT TTAACGCCTG GCGCTAA
 
Protein sequence
MPRFAANLSM MFTEVPFTER FAAAAEAGFQ AVEFLFPYGF AASEIKAKLS RHDLTLALFN 
TSAGDTAAGE WGRAALPGRE HDARADIDLA LEYALALECE QVHIMAGVVP DGADGARYRA 
TFIDNLRYAA DRFAAHDKRI LIEALSPGVK PGYLFSSQYQ ALGIAEEVDR PNVFIQLDTF 
HAQKVDGNLS HLIREYAGRY AHVQIASLPD RHEPDDGEIN YPWLFRLFDD VGYRGWIGCE 
YQPRNTTQDG LGWFNAWR