Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2950 |
Symbol | |
ID | 6518998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2857058 |
End bp | 2858392 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642747976 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_002115758 |
Protein GI | 194735993 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.130328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0175968 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGCT ATCAGCACAT CGCTCGTCAG TTAAAAACGG CCATTGAGCA AGGAGAACTC GCGCCCGGAA CGCGTTTGCC TTCCAGCCGG ACGTGGGCGC AGGAACTGGG CGTTTCTCGC GCCACGGTGG AAAATGCCTA TGGCGAGCTG GTGGCGCAGG GCTGGCTGGA GCGACGTGGC CAGGCAGGCA CGTTTGTGAG CAACGCTCTA CGGTTTGAGA CGGCGCCGCC GATACCCGCT GTTTTTGCCG GAGAAAGTCC GGAACCGAAA CCCTTTCAGA TGGGGTTACC GGCGCTGGAT CTCTTTCCGC GCGAGAAGTG GGCGCGAGTG ATGGGGCGTC GGTTGCGCAC GCAGACGCGC TTCGATCTGG CATTAGGCGA CGTCTGCGGC GAGGCGATTT TGCGCCAGGC GATAGTCGAT TACCTGCGGG TTTCGCGTAG CATTGAATGC CTGCCGGAAC AGGTATTTAT TACCTCCGGA TATGCGGATT CTATGCGGCT GATCCTGCGT ACATTGTCTG TGCCGGGAGA CAGCATGTGG GTGGAAGATC CCGGTTTTCC GTTAATTCGC CCGGTGATAA CGCAGGAGGG GATTACGCTG GCGCCGATTC CGGTCGATGC CGATGGGCTG AATGTCGCGG CGGGGATGCG GGATTGCCCG CAGGGGCGCT TTGCATTGGT GACGCCCGCC CACCAAAGTC CGTTGGGGGT AGCGCTGTCG TTAACTCGCC GACGGCAACT TCTGGCATGG GCGGCGAATG TGCAGGCCTG GATTATTGAA GATGACTACG ACAGCGAATT TCGTTATCAC GGTAAACCGC TTCCGCCGCT CAAGAGTCTG GATGCCCCGC AGCGAGTGAT TTACGCCGGA ACGTTCAGTA AGTCGCTCTT CCCGGCATTA CGTACCGCCT GGCTGGTGGT ACCGATAAAG CAGATTGAGC ATTTCCGCCA GCAGGCGTCG CTGATGCCCT GTAGCGTACC GTTGTTATGG CAGCACACGT TGGCTGATTT TATCCGTGAT GGCCATTTCT GGCGACATCT GAAAAAGATG CGTCAACATT ATGCTCAGCG ACGGTTATGG ATTGAAGAGG CGCTGGCGGA ACAGGGATTT GTTGTGACAT TACAGAAAGG CGGTATTCAA TTGGTTATTG AGGTTGAAGG CGATGATAAA GCGCAGGTAG CGAAAGCGAA TCAGGCCGGA CTGGCGGTAC AGGCGCTAAG CCGTTGGCGA GTGGTTTCAT CAGGAAAGGG GGGCATTTTA CTGTCATTTA CCAATATTAC TTCCGCTGGC ATGGCGAAAC AGGTCGCATG GCAGCTTCGA CAGGCGATAC AGTAA
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Protein sequence | MPRYQHIARQ LKTAIEQGEL APGTRLPSSR TWAQELGVSR ATVENAYGEL VAQGWLERRG QAGTFVSNAL RFETAPPIPA VFAGESPEPK PFQMGLPALD LFPREKWARV MGRRLRTQTR FDLALGDVCG EAILRQAIVD YLRVSRSIEC LPEQVFITSG YADSMRLILR TLSVPGDSMW VEDPGFPLIR PVITQEGITL APIPVDADGL NVAAGMRDCP QGRFALVTPA HQSPLGVALS LTRRRQLLAW AANVQAWIIE DDYDSEFRYH GKPLPPLKSL DAPQRVIYAG TFSKSLFPAL RTAWLVVPIK QIEHFRQQAS LMPCSVPLLW QHTLADFIRD GHFWRHLKKM RQHYAQRRLW IEEALAEQGF VVTLQKGGIQ LVIEVEGDDK AQVAKANQAG LAVQALSRWR VVSSGKGGIL LSFTNITSAG MAKQVAWQLR QAIQ
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