Gene SeSA_A2867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2867 
Symbol 
ID6516315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2766241 
End bp2767380 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content51% 
IMG OID642747900 
Producthypothetical protein 
Protein accessionYP_002115682 
Protein GI194734312 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones9 
Fosmid unclonability p-value0.00679598 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACATTGA TCTGGCTATT AATTTGCGTT GCGTCTGTCC TTACGCTCAA ACAGTATGCG 
CAAAAGAATC TCGATTTGAC CGCCGCCACA ATGGCCCATA GCCTTGAAGC GGCACTGGTA 
TTTTCCGATA ACACGGCCGC AGCGGAAACG CTCGCCACAC TGGGACGCCA GGGACAATTT 
TCAGCGGCGG AGGTCCGCGA TAAAAATGGC CGTATTATCG CCTCATGGCG CTATGATGCG 
CGAGCCGCAG ACGATAAGCT CATTGGCTTA ATTAGCCACT GGCTTTTTCC ATTGCCGGTA 
TCGCAACCCG TCTGGCACAA CGGCAGGGCC ATCGGCGAAG TACGGCTTGT CGCCCGCGAC 
AGCCTTATTG GTCATTTTAT CTGGCTATCG CTGGCAGTGC TGACAGGATG TATTCTGCTG 
GCATCCGGCA TTGCCCTGCT GCTCACGCGT TATTTACACA ATGGCGTTGT GGATGCGCTG 
CAAAATATTA CTGAAGTTGT ACACGACGTT CGCACTAACC GAAATTTTTC ACGCCGGGTA 
CCTGATGAGC GTATTGCGGA ATTTCACCTG TTTGCGCAGG ATTTCAATAG CCTTCTGGAT 
GAGATGGAAG AATGGCAGCT ACGGCTTCAG GCTAAAAATG CCCAGTTACT ACGTACCGCG 
CTGCACGATC CGCTGACGGG GCTTGCCAAT CGCGCAGCAT TTCGCAGCTG TATTAACGCG 
CTGATGAAGG ACAATTCCGC TCGTAGCAGT TCGGCATTGT TATTTCTGGA TGGCGATAAC 
TTTAAATATA TTAATGATAC CTGGGGACAT GCGGCAGGCG ACCGCGTACT TATAGAGGTT 
GCCAAAAGAT TAGCGGAATT CGGTGGTAGC CGTTATCAGA CTTACCGACT CGGCGGCGAT 
GAATTTGCGA TGGTGCTTTA CGATGTACAT TCGGAATATG AAGTACAACG TATTTGCGCA 
GCGCTATCCC AGGCGTTTAA TCGACCTTTT GAACTGCATA ACGGCCAGCG GATAACGATG 
ACCATGAGTA TTGGCTTTGC GCTGACATGG GAACATGCCA CTGCCGAAAA ACTACAAGAA 
CTGGCCGATC GAAATATGTA TCAGGCTAAA CACCGGCGTG CGGAACGCTC TCTAAACTAA
 
Protein sequence
MTLIWLLICV ASVLTLKQYA QKNLDLTAAT MAHSLEAALV FSDNTAAAET LATLGRQGQF 
SAAEVRDKNG RIIASWRYDA RAADDKLIGL ISHWLFPLPV SQPVWHNGRA IGEVRLVARD 
SLIGHFIWLS LAVLTGCILL ASGIALLLTR YLHNGVVDAL QNITEVVHDV RTNRNFSRRV 
PDERIAEFHL FAQDFNSLLD EMEEWQLRLQ AKNAQLLRTA LHDPLTGLAN RAAFRSCINA 
LMKDNSARSS SALLFLDGDN FKYINDTWGH AAGDRVLIEV AKRLAEFGGS RYQTYRLGGD 
EFAMVLYDVH SEYEVQRICA ALSQAFNRPF ELHNGQRITM TMSIGFALTW EHATAEKLQE 
LADRNMYQAK HRRAERSLN