Gene SeSA_A2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2728 
Symbol 
ID6516965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2608318 
End bp2609499 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content49% 
IMG OID642747772 
Producttranscriptional regulator, CdaR 
Protein accessionYP_002115557 
Protein GI194734848 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3835] Sugar diacid utilization regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTGAGAA AACATTACTT GAAAGGGTAT ACCGCGCGGC AAATTGTACA GCGAGCCATG 
AAAATTATTC CTTACTCGGT AAACGTCATG GATGAACATG GCGTCATTAT CGCGTCTGGC 
GAACCTTCGC GGCTTCGCCA GCGTCACGAA GGGGCCATTC TGGCGCTGAA GGAAAACCGT 
ATTGTAGAAA TTGATTCCGC TACCGCCAAT CAGCTAAAAG GCGTGCGATC CGGCATTAAT 
CTTCCCATCT CTTTTCATGA ACAGCTTATC GGCGTGGTCG GCATTACCGG CGAGCCGGAG 
GAGGTTCGCG CGTATGCCGA GCTGGTTAAA ATGGCGGCGG AGCTGGTGAT CGAGCATATG 
GTGCTGATCG AACAGCGACA GTGGGATAAA CGCTATCGCG AAGAGCTGAT CAACCAATTG 
ATTTTGCGAG AAAATTCAAC AGAGTCGTTG CGCTCTATGG CGGCCTATCT GGGCATTGAT 
CTGGCGGTTC CCAGAGTGGT GCTGATTATT GAACTTTCCC AGCCGGATCG CGAAGCGCTG 
CGCAATGTAA TGGATTATTT CGAGAATCAC GCGCGCAACC ATTTGGTGAC GTTTACCGAA 
TTTAATGAAT TAATCATTAT TAAGCCTATC ACGTTAAAAG AGGGAAAGTG GAATACCCGC 
CAGGAAATGG GCGAATTGCA GATTTTTAAA TCATGGGCTG CATCATCGGG CTTTAGCCGT 
ATTTTGGTTG GGGGTTATTT TGCCGGCGAG ACGGGATTGC ACCGATCTTT GCTCACTGCG 
AGAGCCACGC AGGCGATGGC GAAAAGACAA AAGCTGCGCA GCCAGTACAT TTTTTATCAT 
GACCATGCGC TTCCCGCGCT GCTAAGCGGG CTGTCTGAAA GTTGGCAAGT GCAGGAGCTA 
TCGCGTCTGT GGCTGCAACT GGCGCAACAT GACGCGAAAG GCGTATTGCA ACAGACGCTG 
CGGACCTGGT TTGAACATAA TTGTGACCTG ACGCAAACAG CCAAAGCATT GCATATTCAT 
GTGAATACAT TGCGCTATCG CTTACAGCGC TGTGAGGATA TTACACACAT AAAAATCAAC 
GAGTTAAAAA GTACGCTTTG GCTTTATATC GGTATGGAGC TCCAGGCCGA ATCTGTACCG 
TCCGACAAGT TACCGCTGCC AGGTCGAATC GAAATTTGTT GA
 
Protein sequence
MLRKHYLKGY TARQIVQRAM KIIPYSVNVM DEHGVIIASG EPSRLRQRHE GAILALKENR 
IVEIDSATAN QLKGVRSGIN LPISFHEQLI GVVGITGEPE EVRAYAELVK MAAELVIEHM 
VLIEQRQWDK RYREELINQL ILRENSTESL RSMAAYLGID LAVPRVVLII ELSQPDREAL 
RNVMDYFENH ARNHLVTFTE FNELIIIKPI TLKEGKWNTR QEMGELQIFK SWAASSGFSR 
ILVGGYFAGE TGLHRSLLTA RATQAMAKRQ KLRSQYIFYH DHALPALLSG LSESWQVQEL 
SRLWLQLAQH DAKGVLQQTL RTWFEHNCDL TQTAKALHIH VNTLRYRLQR CEDITHIKIN 
ELKSTLWLYI GMELQAESVP SDKLPLPGRI EIC