Gene SeSA_A2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2654 
Symbol 
ID6520028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2535230 
End bp2536114 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content51% 
IMG OID642747700 
ProductDNA-binding transcriptional activator XapR 
Protein accessionYP_002115485 
Protein GI194736343 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00016667 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGAG CCCATCGTAT TGATCTAAAG CTATTACGTT ATTTCCTCGC TGTTGCAGAA 
GAATTGCATT TTGGCCGGGC TGCTGCCCGG TTAAATATGT CACAACCTCC CTTGAGTATC 
CATATCAAAG AACTTGAACA GCAACTGGGT ACATTGTTGT TTATTCGTCA TTCCCGCAGC 
GTTGCATTAA CCCATGCCGG GAAAGTTTTA ATGGAGGAGT CACGTCGCTT GTTAGCCAAT 
GCAAATCAGG CGCTGGCGCG AGTGGAGCAG ATTGGTCGCG GTGAAGCGGG GCGCATTGAA 
CTGGGTGTGG TTGGTACGGC GCTGTGGGGA AGAATGCGCC CTGCGATGCG TCACTTTTTG 
AAAGCAAACC CCAATGTTGA AGTACTTTTT CGCGAAAAGT CTCCAGGTAT GCAAATGGCG 
TTGTTAGAGC GTCGGGAGCT TGATGCAGGG ATCTGGCGTA TGGCTATCGA ACCGGCAGTC 
GGTTTTACCA GCATACGTTT GCATGAATCT GCATTCATGG TTGCAGTTCC GGAAGATCAC 
GATCTGGCAT CCAGAGATTC TGTGCCGCTG GCGGCGTTGC GCAATGAATA TTTTGTCACG 
CTGCCTTCCG TGCATTCTGA TTGGGGATTT TTACAACGTG TATGCCAACA GGCGGGTTTC 
TCGCCAATGA TTATTCGGGA AGTGGTTGAG CCGCAAACGG TGTTGGCGAT GATCAGTATG 
GGGATTGGGA TTACGTTGAT GGCTGATGGC TATGCGCAAA TGAGCTGGCC GGGTGTGGTG 
TTCCGTCCGT TAGAGGAACG TATTCCGGCG GATTTGTATA TTGTGTATGA CCAGCAGCAG 
GCAACGCCAG CACTGGAGAA ACTGGTGGCG GCGTTGACGG TATGA
 
Protein sequence
MERAHRIDLK LLRYFLAVAE ELHFGRAAAR LNMSQPPLSI HIKELEQQLG TLLFIRHSRS 
VALTHAGKVL MEESRRLLAN ANQALARVEQ IGRGEAGRIE LGVVGTALWG RMRPAMRHFL 
KANPNVEVLF REKSPGMQMA LLERRELDAG IWRMAIEPAV GFTSIRLHES AFMVAVPEDH 
DLASRDSVPL AALRNEYFVT LPSVHSDWGF LQRVCQQAGF SPMIIREVVE PQTVLAMISM 
GIGITLMADG YAQMSWPGVV FRPLEERIPA DLYIVYDQQQ ATPALEKLVA ALTV