Gene SeSA_A2622 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2622 
Symbol 
ID6518826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp2507514 
End bp2508455 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content50% 
IMG OID642747670 
Productinner membrane protein YfdC 
Protein accessionYP_002115462 
Protein GI194737910 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.224205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAGCC TTAACGACGA TAAAATTAAC CGGCACAGCA GTGACCTGGA AGTTGAAAGC 
GAAGAAAAAC AAAGCGGTAA AGAGATTGAA GTGGATGAAG ATCGTCTTCC TTCCCGCGCC 
ATGGCGATTC ATGAACATAT TCGCCAGGAT GGTGAAAAAG AAATGGAACG CGATGCGATG 
GCTTTGCTCT GGTCAGCCAT TGCCGCAGGA CTTTCTATGG GGGCATCACT CCTGGCGAAA 
GGGATTTTCC ACGTGCAGCT TGAAGGCGTT CCCGGCGGCT TTTTACTGGA AAATCTCGGC 
TATACCTTTG GTTTTATCAT TGTCATCATG GCCCGCCAGC AATTATTTAC TGAAAATACC 
GTTACTGCCG TATTGCCGGT AATGCAAAAT CCCACTCTGA GTAACGTTGG CCTGCTGATG 
CGCTTATGGG GCGTAGTCTT ATTGGGCAAC CTTATTGGCA CCGGGGTTGC GGCGTGGGCA 
TTTGAATATA TGCCTATATT TGATGAAGAG ACCCGCGACG CCTTTGTCAA AATTGGTATG 
GAGGTCATGA AAAATAGCCC AACGGAGATG TTTGCCAACG CGATTATCTC TGGCTGGATC 
ATCGCCACAA TGGTATGGAT GTTTCCTGCT GCAGGCGGGG CAAAAATTGT GGTCATTATT 
TTGATGACCT GGCTTATCGC GCTGGGCGAT ACCACCCATA TTGTCGTCGG TTCCGTTGAA 
ATTTTGTATT TGGTTTTCAA CGGCACGCTG CCCTGGAGCG ACTTTCTCTG GCCCTTCGCC 
CTTCCCACAC TTGCCGGAAA TATCTGCGGC GGCACCTTTA TTTTCGCATT GATGAGCCAC 
GCGCAGATCC GCAACGATAT GAGCAATAAG CGTAAGGAAG AAGCGAGGCT ACGCGGCGAG 
CGCCTGGAAC GGGAGCGGAA AAAAGCGGAA AAACAGCGCT GA
 
Protein sequence
MDSLNDDKIN RHSSDLEVES EEKQSGKEIE VDEDRLPSRA MAIHEHIRQD GEKEMERDAM 
ALLWSAIAAG LSMGASLLAK GIFHVQLEGV PGGFLLENLG YTFGFIIVIM ARQQLFTENT 
VTAVLPVMQN PTLSNVGLLM RLWGVVLLGN LIGTGVAAWA FEYMPIFDEE TRDAFVKIGM 
EVMKNSPTEM FANAIISGWI IATMVWMFPA AGGAKIVVII LMTWLIALGD TTHIVVGSVE 
ILYLVFNGTL PWSDFLWPFA LPTLAGNICG GTFIFALMSH AQIRNDMSNK RKEEARLRGE 
RLERERKKAE KQR