Gene SeSA_A2602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2602 
Symbol 
ID6517833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand- 
Start bp2487691 
End bp2488869 
Gene Length1179 bp 
Protein Length392 aa 
Translation table11 
GC content60% 
IMG OID642747651 
Producthypothetical protein 
Protein accessionYP_002115443 
Protein GI194735953 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.273192 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAG TTAGCCAAAA AACAACGACC CCGTCTGCGA ATTTTTCGCT GTTCCGCATC 
GCCTTTGCGG TTTTCCTGAC CTATATGACG GTCGGCCTGC CGTTACCCGT CATCCCGCTT 
TTTGTCCATC ACGAACTGGG CTATAGCAAT ACGATGGTTG GGATCGCCGT GGGCATTCAG 
TTTTTTGCGA CGGTACTGAC GCGCGGCTAT GCCGGACGGC TGGCGGATCA ATATGGCGCT 
AAACGATCGG CGTTACAGGG GATGTTTGCC TGCGGGCTGG CGGGCGCCGC CTGGCTCCTG 
GCCGCGCTGT TGCCAGTTTC CGCGCCGATA AAATTCACGC TGCTTATTGT CGGGCGTTTG 
ATCCTCGGAT TTGGCGAAAG CCAGCTGCTG ACCGGAACCC TGACTTGGGG ACTGGGGCTG 
GTTGGCCCAA CGCGTTCCGG TAAGGTGATG TCGTGGAACG GAATGGCGAT TTACGGCGCG 
CTGGCGGCCG GTGCGCCGTT GGGCTTGCTG ATCCATAGCC ACTTTGGCTT CGCGGCGCTG 
GCGGGGACGA CGATGGTTTT ACCGCTGCTG GCCTGGGCAT TCAACGGCAC CGTGCGTAAA 
GTGCCTGCGT ATACGGGGGA GCGACCTTCA CTGTGGAGCG TGGTCGGGCT TATCTGGAAA 
CCGGGCCTGG GCCTGGCATT GCAGGGCGTG GGCTTTGCCG TCATCGGTAC GTTTATTTCA 
CTTTATTTTG TCAGCAATGG CTGGACGATG GCGGGATTCA CCCTGACCGC GTTTGGCGGT 
GCGTTTGTAC TGATGCGCAT ATTGTTCGGT TGGATGCCGG ACCGCTTTGG CGGCGTGAAG 
GTCGCCGTTG TCTCATTGCT GGTTGAGACG GCAGGACTGC TGCTCTTGTG GCTGGCGCCG 
ACGGCCTGGA TAGCGCTGGT AGGCGCGGCG CTCACCGGGG CTGGGTGTTC ACTGATTTTC 
CCGGCGCTGG GCGTGGAGGT TGTGAAACGC GTACCTGCAC AGGTACGCGG TACGGCGCTC 
GGCGGCTACG CCGCGTTTCA GGATATCTCC TACGGCGTTA CCGGCCCGCT GGCGGGCATG 
CTGGCCACGT CATGCGGCTA TCCTTCCGTA TTTCTCGCGG GAGCGATCTC CGCAGTGGTT 
GGCATCCTGG TGACGATATT ATCGTTCCGG CGTGGTTAA
 
Protein sequence
MTAVSQKTTT PSANFSLFRI AFAVFLTYMT VGLPLPVIPL FVHHELGYSN TMVGIAVGIQ 
FFATVLTRGY AGRLADQYGA KRSALQGMFA CGLAGAAWLL AALLPVSAPI KFTLLIVGRL 
ILGFGESQLL TGTLTWGLGL VGPTRSGKVM SWNGMAIYGA LAAGAPLGLL IHSHFGFAAL 
AGTTMVLPLL AWAFNGTVRK VPAYTGERPS LWSVVGLIWK PGLGLALQGV GFAVIGTFIS 
LYFVSNGWTM AGFTLTAFGG AFVLMRILFG WMPDRFGGVK VAVVSLLVET AGLLLLWLAP 
TAWIALVGAA LTGAGCSLIF PALGVEVVKR VPAQVRGTAL GGYAAFQDIS YGVTGPLAGM 
LATSCGYPSV FLAGAISAVV GILVTILSFR RG