| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2388 |
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| Symbol | |
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| ID | 6515509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011094 |
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| Strand | - |
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| Start bp | 2264300 |
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| End bp | 2266786 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642747446 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_002115239 |
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| Protein GI | 194738189 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.769414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAAGT TAAACGCCAT CACGCTGTCA CTTTTTGCAG CGTTGCTTAC TTCACCCGCC
TGGGCTGAAG AAGAAACATT CGATACTAAC TTTATGTTCG GTGGGTTGAA AGGTGAAAAG
GTGTCCCGTT ATCAGATTGA TAGCACCAAA CCCATGGCTG GCGTTTATGA GATGGACGTT
TATGTCAATA AAGAATGGCG TGGAACTTAT GAGGTTAATA TTCAGGATGA CCCCGATAGT
ACCTGTATTT CTCCGGATCT GATCGCCAGC CTGGGAATTA AATTTACCCC GCAGAGTACA
ACAGTAGAAA ATGAATGTAT TGCGCTGAAA ACGGTGGTTC ATGGAGGTAG TGTTTCTTAT
GACACTGCCG CTTTTAACCT TTATCTGAGC GTCCCTCAGG CTTATGTGTT GGAATATGAA
GCGGGCTATG CGTCTCCAGA GACATGGGAC CGTGGAATTA ACGCTTTTTA TACATCGTAT
TATGCCAGCG AATATTACAG CCATTATAAA AGCGGCGGTA GTGAGAAAAA TACTTACGCA
AATTTTGTCA GCGGATTGAA TCTGCTTGGA TGGCAATTAC ATTCTAACGC TAATTTTTCC
AAAAGTGACA ATTCAGCTGG CAAATGGCAG AGCAATACTC TGTATCTGGA ACGTGATTTC
CCGGCGGTAC TGGGGACAAC GCGTCTGGGG GAACAGTACA CTAGCGGGGA TATGTTTGAT
ACGGTGCGCT TTCGCGGGGT GCGCTTCTGG CGTGATATGC AAATGCTGCC GCACTCTAAG
CAAAATTTCG CTCCGGTTGT GCGTGGCGTG GCGCAAAGTA ACGCCCTGGT GACGGTTGAA
CAGAATGGCT TCATTGTTTA TCAAAAAGAA GTTCCGCCTG GCCCCTTTGT ATTTGAAGAT
CTTCAGCTGG CAGGGGGGGG AGCCGATCTG GACGTGAGCG TTAAAGAGGC TGACGGTACT
GTTTCACGGT TTATTGTTCC GTATTCTTCC GTTCCCAATA TGGTGCAGCC CGGCGTAGCA
AAATATGATT TCGCCGCCGG ACGAAGCAGA ATTGAAGGAG CCTCTCAGCA AACTGATTTT
CTCCAGGGAA CCTATCAGTA CGGGGTCAAT AACCTGCTAA CGTTGTATGG CGGAACGATG
TTAGCCAGCG ATTATCGCTC ATTTACCCTT GGCACTGGGT GGAACACGCT GATTGGCGCG
GTATCTGTCG ACGGTACGTT GTCTCATAGC AAGCAGGATA ATGGCGATGT TTTTGATGGG
GAAAGCTACC AGATTGCCTG GAATAAATAT CTCCCGCAAT CAGCCACCCA TTTTTCTCTG
GCAGCATATC GCTACTCATC ACGTGATTAT CGCACTTTTA ACGATCATGT CTGGGCTAAT
AACCGGGACA ACTATCGTCG CGATGATGAC GATATTTATG ATATTGCAGA TTATTATGAG
AATGACTTTG GGCGTAAAAA TACTTTCACT CTCAATATTA ATCAGACGCT ACCCGATGGG
TGGGGATATT TTACTGCCAG CGCCCTGTGG CGCGACTATT GGGGGCGTAG CGGTACAGGC
AAGGATTATC AGTTAAGCTA CAGTAATACC TGGCAGCGGC TCAGTTTTAC GCTATCGGCA
ACCCAGACTT ATGACAGCGA TAACCGTGAA GATAAGCGCT TTAATATCTA TTTATCGATT
CCCTTAACAT GGGGAGTAAA GGAGAATGGG GGAAATCGTG ATATCCATTT ATCGAATTCC
ACCACCTTTG ACGATCAAGG TTATGAGGCG AATAACACCA GCCTTAGCGG CACGTTCGGT
AATCGCGATC AGTTTAATTA TACGACTAAC CTCAGCCAGC AGCGACAGGA ACACCAAACG
ACATTCGGGG GATCAGTAAC CTGGAACGCC CCGCTGGCGA CGGTCGGCGG CAGTTACAGC
CAATCCAATC AATATCATCA GGTGGGCGGA AATATTCAGG GAGGGCTGGT TGCATGGGCC
GATGGCGTGC ATTTAGCCTC TCGCCTTAAT GATACTATCG CGATTATTAA CGCGCCGTAC
CTGGAAGGCG CGGCGGTGCA GGGGCGTCCC TATTTACGTA CCAATGCAAA AGGTTATGCC
GTATTTGAAG CATTGACGCC ATACCGGCAA AATTTTATCT CTCTTGATGT CTCCGAGAGT
GAAAGTGATG TCGCTCTGCT GGGAAACCGT AAAGTTACAG TGCCTTATCG CGGAGCCGTA
GTGGTGGTTG ATTTTGAAAC AGAGACCAGT AAACCTTTTT ATTTCCTGGC GCGGCGCGCA
GATGGCGAGC CTTTAACGTT TGGTTATGAA GTGGAAGATG ACGAGAGAAA TAATGTAGGA
CTGGTAGGTC AGGGGAGCCG GGTATTTATT CGTACTGAAA AGGTTCCCGT TTCGGTAAAA
GTCGCAACAG ATAAACAACA GGGTCTTTTC TGTAAGATCA CTTTTGATAA ACAGATTGAT
GAAAATAACG TTTATATTTG TCGGTAA
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| Protein sequence | MEKLNAITLS LFAALLTSPA WAEEETFDTN FMFGGLKGEK VSRYQIDSTK PMAGVYEMDV
YVNKEWRGTY EVNIQDDPDS TCISPDLIAS LGIKFTPQST TVENECIALK TVVHGGSVSY
DTAAFNLYLS VPQAYVLEYE AGYASPETWD RGINAFYTSY YASEYYSHYK SGGSEKNTYA
NFVSGLNLLG WQLHSNANFS KSDNSAGKWQ SNTLYLERDF PAVLGTTRLG EQYTSGDMFD
TVRFRGVRFW RDMQMLPHSK QNFAPVVRGV AQSNALVTVE QNGFIVYQKE VPPGPFVFED
LQLAGGGADL DVSVKEADGT VSRFIVPYSS VPNMVQPGVA KYDFAAGRSR IEGASQQTDF
LQGTYQYGVN NLLTLYGGTM LASDYRSFTL GTGWNTLIGA VSVDGTLSHS KQDNGDVFDG
ESYQIAWNKY LPQSATHFSL AAYRYSSRDY RTFNDHVWAN NRDNYRRDDD DIYDIADYYE
NDFGRKNTFT LNINQTLPDG WGYFTASALW RDYWGRSGTG KDYQLSYSNT WQRLSFTLSA
TQTYDSDNRE DKRFNIYLSI PLTWGVKENG GNRDIHLSNS TTFDDQGYEA NNTSLSGTFG
NRDQFNYTTN LSQQRQEHQT TFGGSVTWNA PLATVGGSYS QSNQYHQVGG NIQGGLVAWA
DGVHLASRLN DTIAIINAPY LEGAAVQGRP YLRTNAKGYA VFEALTPYRQ NFISLDVSES
ESDVALLGNR KVTVPYRGAV VVVDFETETS KPFYFLARRA DGEPLTFGYE VEDDERNNVG
LVGQGSRVFI RTEKVPVSVK VATDKQQGLF CKITFDKQID ENNVYICR
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