Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2354 |
Symbol | |
ID | 6516877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2226535 |
End bp | 2228391 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642747416 |
Product | putative assembly protein |
Protein accession | YP_002115209 |
Protein GI | 194735691 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.827623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.53573 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGACGAT TTCTGACGAC GCTGATGATT CTCCTGGTCG TGCTGGTGGC CGGATTCTCT GCGTTGGTAT TGTTGGTCAA TCCGAATGAT TTCCGCGCCT ATATGGTGCA GCAGGTTGCC GCGCGTAGTG AATATCAGTT GCAACTGGAC GGGCCGCTGC GCTGGCACGT ATGGCCGCAA CTCAGCATCC TTTCCGGGCG AATGACGCTA ACGGCGCGAG GCGCCAGCGA ACCGCTGGTG CGGGCTGACA ATATGCGCCT GGATGTCGCT TTATGGCCGC TGTTGAGTCA TCAGCTTCAT GTTAAGCAGG TAATGCTGAA AGGCGGGGTG ATTCAACTGA CGCCGCAAAC GGAAGCGGTA CGCAGCGATG ATGCGCCGGT CGCGCCGAAA GATAATACCT TGCCGGACGT AGCGGAAGAT CGCGGCTGGT CGTTTGATAT TCGTAGCCTG CGCGTTGCCG ACAGCGTGCT GGTTTTCCAG CATGAAAATG ATGATCAGGT CACGGTGCGC GATATTCGTC TGAATATGGA ACAAGATGCC GAGCATCGCG GCACGTTTGA TTTTTCGGGA CGCGTGAACC GCGATCAGCG GGATCTTGCT TTATCGTTCA GCGGAACGGT GGATGCTTCC GATTATCCGC ATAATTTAAC CGCGGGTATT GAGCAACTGC GCTGGCAATT GCAGGGCGCG GATCTACCGG CGCAGGGGAT TGAGGGGCAG GGACAACTGC AGGCGCAGTG GCAGGAGGCG CAAAAACGTC TTTCATTTAA CCACTTAAAT TTAACGGCGA ATGACAGTTC TCTGACCGGG CATGTTCAGG TAACGCTGGC GGAGCAGCCG GAATGGCAAA TTGACCTCCA GTCCAGCAAG CTTAATCTGG ACAACCTGTT GCCGCATCAT AGCACCGTGG CACAGACGGG CGGCGCGGTG TCGCAGGGGC AAAATACGCT CCCCCTGACC AGGCCAGTTA TCGCGTCGCG TGTTGGTGCG CCGCCTTATC AGGGGCTGCA AAGCTTTACG GCGGAGATTG CTTTACAGGC GGATTCAGTT CGCTGGCGGG GAATGGACTT TACCCAGGTT TCGACGAAGA TGTCTAATCA GGCCGGATTG CTGGATATCA CCGAGTTGCA GGGGAAACTG GCCGACGGAG AGATGTCGCT GCCCGGCACG CTTGACGCCC GCACCGCCAG TCCGCGCATC GAATTCCACC CTCGCCTCAA CCATGTTGAG ATTGGGACTA TCCTGAAAGC CTTCAATTAT CCGATTAGCC TGACCGGTAA GATGTCGCTG GTTGGCGATT TCTCCGGGGC GGATATTGAC GCGGAGGCGT TTCGCCATAG CTGGAAAGGA AAAGCGCATG TTGACATGAG CAATACGCGC CTCGAAGGAA TGAATTTCCA ACAACTGGTG CAGCAGGCCG TAGAGCGAAG CGGCGGCGAC GCGCAGCAGT CGCAGGAAAA TATGGACAAC GCGACCCGAC TGGATCGCTT CACGACCGAT CTGGCGCTAA ATAAGGGCAC GCTGACGCTC GACGACATGG TCGGGCAATC TTCTATGCTG GCGTTAACCG GCAGCGGAAC GCTGGATCTG GTTAAGCAGA GCTGTGATAC GCAATTTAAT CTGCGTGTGC TGGGCGGATG GAACGGCAAT AGCAACCTGA TCACCTTCCT GAAAGAGACG CCGGTGCCGC TGCGCGTCTA TGGCAAGTGG CAGGAGCTGA ACTATACCCT GCAAGTGGAT CAGTTATTGC GCAAGCATTT ACAGGATGAG GCGAAGCGTC GGCTCAACGA CTGGGCGGAT CGCAATAAAG ATACCCGTAA CGGTAAAGAT GTGAAGAAAC TGCTGGATAA GCTGTAG
|
Protein sequence | MRRFLTTLMI LLVVLVAGFS ALVLLVNPND FRAYMVQQVA ARSEYQLQLD GPLRWHVWPQ LSILSGRMTL TARGASEPLV RADNMRLDVA LWPLLSHQLH VKQVMLKGGV IQLTPQTEAV RSDDAPVAPK DNTLPDVAED RGWSFDIRSL RVADSVLVFQ HENDDQVTVR DIRLNMEQDA EHRGTFDFSG RVNRDQRDLA LSFSGTVDAS DYPHNLTAGI EQLRWQLQGA DLPAQGIEGQ GQLQAQWQEA QKRLSFNHLN LTANDSSLTG HVQVTLAEQP EWQIDLQSSK LNLDNLLPHH STVAQTGGAV SQGQNTLPLT RPVIASRVGA PPYQGLQSFT AEIALQADSV RWRGMDFTQV STKMSNQAGL LDITELQGKL ADGEMSLPGT LDARTASPRI EFHPRLNHVE IGTILKAFNY PISLTGKMSL VGDFSGADID AEAFRHSWKG KAHVDMSNTR LEGMNFQQLV QQAVERSGGD AQQSQENMDN ATRLDRFTTD LALNKGTLTL DDMVGQSSML ALTGSGTLDL VKQSCDTQFN LRVLGGWNGN SNLITFLKET PVPLRVYGKW QELNYTLQVD QLLRKHLQDE AKRRLNDWAD RNKDTRNGKD VKKLLDKL
|
| |