Gene SeSA_A2324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2324 
SymbolrfbG 
ID6516115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2193808 
End bp2194887 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content43% 
IMG OID642747387 
ProductCDP-glucose 4,6-dehydratase 
Protein accessionYP_002115180 
Protein GI194737521 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02622] CDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00566999 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTGATA AAAATTTTTG GCAAGGTAAA CGTGTATTCG TTACCGGCCA TACTGGCTTT 
AAAGGAAGCT GGCTTTCGCT ATGGCTGACT GAAATGGGTG CAATTGTAAA AGGCTATGCA
CTTGATGCGC CAACTGTTCC AAGTTTATTT GAGATAGTGC GTCTTAATGA TCTTATGGAA
TCTCATATTG GCGATATTCG TGATTTTGAA AAGCTGCGCA ATTCTATTGC AGAATTTAAG
CCAGAAATTG TTTTCCATAT GGCAGCCCAG CCTTTAGTGC GCCTATCTTA TGAACAGCCA
ATCGAAACAT ACTCAACAAA TGTTATGGGT ACTGTCCATC TGCTTGAAGC AGTTAAGCAG
GTAAGTAACA TAAAGGCAGT CGTAAATATC ACCAGTGATA AGTGCTACGA CAATCGTGAG
TGGGTGTGGG GCTATCGTGA GAACGAACCC ATGGGAGGGT ACGATCCATA CTCTAATAGT
AAAGGTTGTG CAGAATTAGT CGCGTCTGCA TTCCGGAACT CATTCTTCAA TCCTGCAAAT
TATGAGCAAC ATGGCGTTGG TTTGGCGTCT GTGAGAGCTG GTAATGTCAT AGGTGGAGGC
GATTGGGCTA AAGACCGTTT AATTCCCGAT ATTCTGCGCT CATTTGAAAA TAACCAGCAG
GTTATTATTC GAAACCCATA TTCTATCCGT CCCTGGCAGC ATGTACTGGA GCCTCTTTCT
GGTTACATAG TAGTGGCGCA ACGCTTGTAT ACAGAAGGTG CTAAGTTTTC TGAAGGATGG
AATTTCGGCC CACGTGATGA AGATGCGAAG ACGGTCGAAT TTATTGTTGA CAAGATGGTC
ACGCTTTGGG GTGATGATGC AAGCTGGTTA CTGGATGGTG AGAATCATCC TCATGAGGCA
CATTACCTGA AACTGGATTG CTCTAAAGCA AATATGCAAT TAGGATGGCA TCCGCGTTGG
GGATTGACTG AAACACTTGG TCGCATCGTA AAATGGCATA AAGCATGGAT TCGCGGCGAA
GATATGTTGA TTTGTTCAAA GCGTGAAATC AGCGACTATA TGTCTGCAAC TACTCGTTAA
 
Protein sequence
MIDKNFWQGK RVFVTGHTGF KGSWLSLWLT EMGAIVKGYA LDAPTVPSLF EIVRLNDLME 
SHIGDIRDFE KLRNSIAEFK PEIVFHMAAQ PLVRLSYEQP IETYSTNVMG TVHLLEAVKQ
VSNIKAVVNI TSDKCYDNRE WVWGYRENEP MGGYDPYSNS KGCAELVASA FRNSFFNPAN
YEQHGVGLAS VRAGNVIGGG DWAKDRLIPD ILRSFENNQQ VIIRNPYSIR PWQHVLEPLS
GYIVVAQRLY TEGAKFSEGW NFGPRDEDAK TVEFIVDKMV TLWGDDASWL LDGENHPHEA
HYLKLDCSKA NMQLGWHPRW GLTETLGRIV KWHKAWIRGE DMLICSKREI SDYMSATTR