Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2309 |
Symbol | gnd |
ID | 6516637 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | - |
Start bp | 2178639 |
End bp | 2180045 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642747375 |
Product | 6-phosphogluconate dehydrogenase |
Protein accession | YP_002115168 |
Protein GI | 194737009 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00877145 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGTCCAAGC AACAGATCGG CGTCGTCGGT ATGGCAGTGA TGGGGCGCAA CCTCGCGCTC AACATCGAAA GCCGTGGTTA TACCGTCTCC GTTTTCAACC GCTCCCGTGA AAAGACCGAA GAAGTGATTG CCGAGAATCC CGGCAAAAAG CTGGTGCCTT ATTATACGGT GAAAGAGTTT GTTGAATCCC TCGAAACGCC TCGTCGTATC CTGTTAATGG TGAAAGCGGG CGCAGGTACT GATGCAGCTA TCGATTCGCT GAAACCGTAT CTGGAAAAAG GCGATATCAT TATTGATGGC GGTAACACCT TCTTCCAGGA CACAATCCGT CGCAATCGCG AGCTGTCTGC GGAAGGTTTT AACTTTATCG GTACCGGTGT TTCCGGTGGT GAAGAGGGCG CGCTGAAAGG GCCATCTATC ATGCCTGGCG GTCAGAAAGA TGCCTATGAA CTGGTGGCGC CGATCCTGAC GAAGATTGCT GCCGTGGCGG AAGATGGCGA ACCGTGCGTG ACCTATATCG GCGCCGATGG TGCTGGTCAC TACGTCAAGA TGGTCCATAA TGGTATTGAA TATGGCGATA TGCAGCTTAT CGCTGAAGCT TACTCCTTGC TGAAAGGCGG CCTGAACCTC AGCAATGAAG AGTTGGCGAA CACTTTTACT GAGTGGAATA ACGGCGAGCT GAGCAGCTAT CTGATCGACA TCACTAAAGA CATCTTCACT AAAAAAGATG AAGACGGAAA CTACCTGGTG GATGTCATTC TTGATGAAGC CGCCAACAAA GGGACCGGTA AATGGACCAG CCAGAGCGCG CTGGATCTGG GTGAACCGCT GTCGCTGATT ACCGAATCCG TCTTTGCGCG TTACATCTCT TCGTTGAAAG CGCAACGTGT TGCCGCATCT AAAGTGCTCT CCGGGCCGAA AGCGCAGCCG GCAGGCGACA AAGCGGAATT TATCGAGAAA GTGCGTCGCG CGCTGTATCT TGGCAAGATC GTCTCTTATG CGCAGGGCTT CTCGCAGCTA CGCGCCGCGT CTGATGAATA TCACTGGGAT CTTAACTACG GCGAGATTGC TAAGATTTTC CGTGCGGGCT GTATCATTCG CGCTCAGTTC CTGCAGAAAA TCACCGATGC TTACGCAGAA AACGCCGGTA TTGCCAATTT GCTGTTAGCG CCTTACTTCA AGAAAATTGC TGATGAGTAC CAGCAGGCGC TGCGTGATGT TGTGGCTTAC GCGGTGCAGA ACGGCATTCC GGTGCCGACA TTCTCTGCGG CAGTGGCCTA CTATGACAGC TATCGCGCCG CAGTACTGCC AGCTAACTTA ATTCAGGCGC AGCGTGACTA CTTTGGTGCG CACACCTATA AACGTACTGA TAAAGAAGGC ATTTTCCATA CCGAATGGTT GGAGTAA
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Protein sequence | MSKQQIGVVG MAVMGRNLAL NIESRGYTVS VFNRSREKTE EVIAENPGKK LVPYYTVKEF VESLETPRRI LLMVKAGAGT DAAIDSLKPY LEKGDIIIDG GNTFFQDTIR RNRELSAEGF NFIGTGVSGG EEGALKGPSI MPGGQKDAYE LVAPILTKIA AVAEDGEPCV TYIGADGAGH YVKMVHNGIE YGDMQLIAEA YSLLKGGLNL SNEELANTFT EWNNGELSSY LIDITKDIFT KKDEDGNYLV DVILDEAANK GTGKWTSQSA LDLGEPLSLI TESVFARYIS SLKAQRVAAS KVLSGPKAQP AGDKAEFIEK VRRALYLGKI VSYAQGFSQL RAASDEYHWD LNYGEIAKIF RAGCIIRAQF LQKITDAYAE NAGIANLLLA PYFKKIADEY QQALRDVVAY AVQNGIPVPT FSAAVAYYDS YRAAVLPANL IQAQRDYFGA HTYKRTDKEG IFHTEWLE
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