| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2264 |
|---|
| Symbol | |
|---|
| ID | 6517463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 2142223 |
|---|
| End bp | 2142873 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642747333 |
|---|
| Product | phage prohead protease, HK97 family |
|---|
| Protein accession | YP_002115126 |
|---|
| Protein GI | 194736329 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3740] Phage head maturation protease |
|---|
| TIGRFAM ID | [TIGR01543] phage prohead protease, HK97 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0493377 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGA AACAACGTCT TGATGTACCG CTGAGTCTTA AATCTGTCAG TGACTCCGGT
GAGTTTGAAG GGTATGGCTC CGTCTTTGGT GTAAAGGACA GCCACGATGA TGTGGTGATG
TCCGGGGCAT TTGCTGCTTC CCTGCGGGAG TGGAGTGACA GAAAAGCGTT ACCTGCGCTG
CTCTGGCAGC ACCGCATGGA TGAGCCCATC GGTGTTTACA CCGAAATGAA GGAAGACGAT
GTCGGGCTTT ACGTTAAGGG GCGATTGCTC ATTGATGATG ATCCCCTGGC AAAACGCGCA
CATGCACACA TGAAGGCCGG TTCATTAACC GGCCTTTCTA TTGGGTACGT ATTGAAAGAC
TGGGAATACG ACCGGAGCAA AGAAGCCTTT CTGCTGAAAG AAATCGACCT CTGGGAAGTC
AGTCTGGTGA CGTTCCCGTC AAACGATGAG GCACGGATCA GCGACGTCAA GAACGCGCTG
GCCCGCGGGG AAATCCCCGA ACAGAAAAAA ATCGAAAGAG TCCTGCGTGA TGTCGGACTC
TCCCGTACCC AGGCCAAAGC ATTCATGGCC GGGGGCTATG GCGCACTGTC CCTGCGCGAC
GCTGAGGATG TGGGCTCTGC ACTGAATGTA CTGAAAAATC TGAACTTCTA A
|
|---|
| Protein sequence | MQTKQRLDVP LSLKSVSDSG EFEGYGSVFG VKDSHDDVVM SGAFAASLRE WSDRKALPAL
LWQHRMDEPI GVYTEMKEDD VGLYVKGRLL IDDDPLAKRA HAHMKAGSLT GLSIGYVLKD
WEYDRSKEAF LLKEIDLWEV SLVTFPSNDE ARISDVKNAL ARGEIPEQKK IERVLRDVGL
SRTQAKAFMA GGYGALSLRD AEDVGSALNV LKNLNF
|
|---|
| |