Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A2141 |
Symbol | rcsA |
ID | 6516491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 2044594 |
End bp | 2045217 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642747219 |
Product | colanic acid capsular biosynthesis activation protein A |
Protein accession | YP_002115017 |
Protein GI | 194735620 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000944438 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.224442 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAACGA TTATTATGGA TTTATGCAGT TACACCCGGC TAGGGTTAAG CGGGTATCTG GTCAGCAGAG GGGTGAAAAG AAGGGAAATC AACGACATCG AAACCGTTGA CGAACTCGCT ATCGCTTGTG GCGCGCATCA GCCTTCGGTG GTGTTTATTA ATGAGGACTG TTTCATCCAT ACGCCTTCAG ACAGTCAACA AATAAAGCAA ATCATTAATC AACATCCTGA CACTTTATTT ATTGTTTTTA TGGCAATTGC TAATGTGCAT TTTGATGAAT ATTTATTAGT AAGAAAAAAC TTATTGATTA GCTCAAAATC GATTAAACCT GACTCGCTGG ATACCATTCT TGGCGATATT CTGAAAAAAG AGTCGGGTAT TTCAGGAACC ATAAATTTAC CAACATTATC GTTAAGTCGA ACTGAATCCA GCATGTTGCG AATGTGGATG GAAGGTCAGG GAACCATTCA GATTTCTGAC AGAATGAATA TTAAAGCAAA AACAGTATCC TCCCATAAGG GGAATATAAA AAGAAAGATA AAAACGCATA ATAAACAAGT TATCTATCAT GTAGTACGGC TGACAGATAA CGTCACTAAC GGCATTTTTG TTAACATGCG CTGA
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Protein sequence | MSTIIMDLCS YTRLGLSGYL VSRGVKRREI NDIETVDELA IACGAHQPSV VFINEDCFIH TPSDSQQIKQ IINQHPDTLF IVFMAIANVH FDEYLLVRKN LLISSKSIKP DSLDTILGDI LKKESGISGT INLPTLSLSR TESSMLRMWM EGQGTIQISD RMNIKAKTVS SHKGNIKRKI KTHNKQVIYH VVRLTDNVTN GIFVNMR
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