Gene SeSA_A2120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2120 
Symbol 
ID6516082 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2028839 
End bp2030323 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content51% 
IMG OID642747198 
Productcytoplasmic alpha-amylase 
Protein accessionYP_002114996 
Protein GI194735074 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.070724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.352748 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACC CCACGTTATT GCAGTACTTC CACTGGTATT ATCCCGACGG CGGTAAACTC 
TGGCCTGAGC TGGCGGAACG TGCTGATGGG CTGAATGATA TCGGTATCAA TATGGTCTGG
CTACCGCCCG CCTGTAAAGG CGCCTCCGGC GGCTATTCCG TAGGCTATGA TAGCTACGAC
CTGTTTGACC TCGGCGAATT TGACCAAAAA GGAACTATCG CGACAAAGTA CGGCGATAAA
CGCCAGTTAC TGACGGCGAT AGACGCGCTC AAAAAAAATA ATATTGCGGT GCTGCTCGAC
GTCGTCGTGA ATCACAAAAT GGGGGCAGAC GAAAAAGAAC GTATTCGCGT TCAGCGCGTG
AATCAGGATG ACCGCACGCA AATCGATGAC AACATCATTG AATGCGAAGG CTGGACGCGC
TACACCTTCC CTGCCCGCGC GGGCCAGTAT TCCAACTTTA TTTGGGACTA TCACTGTTTC
AGCGGCATTG ATCACATCGA GAATCCCGAC GAAGACGGCA TTTTTAAGAT CGTCAATGAC
TATACCGGCG ATGGCTGGAA CGATCAGGTT GATGATGAGA TGGGTAATTT CGACTATCTG
ATGGGTGAAA ATATCGATTT TCGCAATCAC GCGGTTACGG AAGAGATTAA ATATTGGGCT
CGTTGGGTCA TGGAACAAAC CCACTGTGAC GGCTTTCGCC TGGACGCGGT AAAACATATA
CCCGCCTGGT TTTATAAAGA ATGGATTGAG CATGTACAGG CGGTTGCACC AAAACCGCTG
TTTATTGTCG CAGAATACTG GTCGCATGAA GTAGATAAAC TGCAAACGTA CATCGATCAG
GTCGACGGGA AAACCATGCT GTTCGACGCG CCGTTGCAGA TGAAATTTCA CGAGGCCTCG
CGCCAGGGCG CGGAGTATGA CATGCGCCAC ATTTTCACCG GCACGCTGGT AGAAGCCGAC
CCTTTTCATG CGGTGACGCT GGTCGCTAAC CACGATACAC AACCGTTACA GGCGCTGGAA
GCGCCTGTAG AACCCTGGTT CAAACCATTG GCCTATGCGC TGATCCTGCT GCGTGAAAAC
GGCGTGCCGT CGGTGTTTTA TCCCGATTTA TACGGCGCCA GCTATGAGGA TAGCGGCGAA
AATGGCGAGA CCTGTCGGGT CGACATGCCG GTGATTAACC AACTGGATCG GCTGATCCTC
GCTCGTCAGC GTTTTGCGCA CGGTATACAA ACTCTCTTTT TCGATCATCC TAACTGTATC
GCCTTTAGTC GCAGCGGTAC TGAAGAGAAT CCAGGCTGTG TGGTCATACT TTCCAATGGC
GACGACGGTG AAAAAACCCT CCTGCTCGGC GACAATTACG CTAACAAGAC CTGGCGTGAT
TTTCTGGGAA ACCGCAGTGA GCATGTTGTA ACTAATGATC AAGGCGAAGC GACGTTCTTC
TGCAACGCAG GCAGCGTCAG CGTGTGGGTC ATTGAGGACG TGTGA
 
Protein sequence
MKNPTLLQYF HWYYPDGGKL WPELAERADG LNDIGINMVW LPPACKGASG GYSVGYDSYD 
LFDLGEFDQK GTIATKYGDK RQLLTAIDAL KKNNIAVLLD VVVNHKMGAD EKERIRVQRV
NQDDRTQIDD NIIECEGWTR YTFPARAGQY SNFIWDYHCF SGIDHIENPD EDGIFKIVND
YTGDGWNDQV DDEMGNFDYL MGENIDFRNH AVTEEIKYWA RWVMEQTHCD GFRLDAVKHI
PAWFYKEWIE HVQAVAPKPL FIVAEYWSHE VDKLQTYIDQ VDGKTMLFDA PLQMKFHEAS
RQGAEYDMRH IFTGTLVEAD PFHAVTLVAN HDTQPLQALE APVEPWFKPL AYALILLREN
GVPSVFYPDL YGASYEDSGE NGETCRVDMP VINQLDRLIL ARQRFAHGIQ TLFFDHPNCI
AFSRSGTEEN PGCVVILSNG DDGEKTLLLG DNYANKTWRD FLGNRSEHVV TNDQGEATFF
CNAGSVSVWV IEDV