Gene SeSA_A2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A2117 
SymbolfliD 
ID6519469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp2026574 
End bp2027977 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content50% 
IMG OID642747195 
Productflagellar capping protein 
Protein accessionYP_002114993 
Protein GI194738249 
COG category[N] Cell motility 
COG ID[COG1345] Flagellar capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.686409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.236334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAA TTTCATCATT AGGTGTGGGA TCAAACTTAC CGTTAGACCA GTTGTTGACA 
GACCTGACAA AGAACGAAAA AGGACGCTTA ACGCCAATTA CCAAACAGCA GAGCGCGAAT
TCGGCAAAGC TAACCGCCTA TGGCACATTG AAAAGCGCAT TAGAAAAATT CCAGACGGCA
AATACCGCGT TAAATAAAGC GGATTTATTT AAGTCTACCG TGGCGTCCAG CACGACGGAG
GATCTCAAAG TCAGTACTAC CGCTGGCGCT GCCGCAGGGA CTTATAAGAT TAGCGTAACC
CAGCTTGCCG CCGCACAGTC GCTGGCGACA AAAACCACCT TCGCAACCAC CAAAGAGCAG
TTGGGCGATA CGTCGGTCAC GTCCCGAACG ATTAAAATTG AACAGCCGGG ACGTAAAGAG
CCGCTGGAAA TTAAGCTGGA TAAAGGCGAC ACCTCCATGG AGGCGATCCG TGACGCCATC
AATGACGCCG ACAGCGGTAT CGCCGCCAGT ATCGTTAAGG TCAAAGAGAA CGAATTCCAG
TTGGTGCTTA CCGCCAATAG CGGTACTGAC AATACGATGA AGATCACGGT GGAAGGCGAT
ACAAAACTTA ACGATCTACT CGCTTATGAC AGCACCACCA ATACCGGCAA TATGCAAGAG
CTGGTGAAAG CAGAAAACGC GAAGCTGAAC GTAAACGGCA TCGACATTGA GCGTCAGAGC
AATACCGTAA CCGACGCCCC TCAGGGGCTT ACGCTCACCC TGACGAAGAA AGTGACCGAC
GCGACCGTGA CGGTAACGAA AGATGATACC AAGGCGAAAG AGGCGATTAA ATCCTGGGTG
GATGCCTATA ACTCGCTGGT GGATACCTTT AGCTCGTTAA CCAAATATAC CGCCGTTGAG
CCGGGCGAAG AAGCCAGCGA TAAAAACGGC GCGCTGTTAG GCGATAGTGT GGTTCGTACT
ATCCAGACCG GGATTCGGGC ACAATTTGCC AATAGCGGCA GTAATTCTGC GTTCAAAACA
ATGGCGGAAA TTGGCATCAC CCAGGATGGG ACTTCCGGCA AACTGAAGAT TGATGATGAT
AAGCTGACCA AAGTACTGAA AGATAACACA GCCGCAGCGC GTGAGCTGTT GGTAGGCGAT
GGTAAAGAAA CGGGGATCAC CACCAAAATT GCCACCGAAG TGAAAAGTTA TCTGGCGGAT
GACGGCATTA TTGATAATGC GCAGGACAAC GTTAACGCCA CGCTGAAAAG CCTGACAAAA
CAGTACCTGT CCGTTAGCAA CAGCATCGAT GAAACCGTTG CCCGTTACAA GGCCCAGTTT
ACCCAACTGG ATACCATGAT GAGTAAACTG AATAACACCA GTAGTTATTT GACCCAGCAA
TTTACAGCTA TGAACAAGTC CTGA
 
Protein sequence
MASISSLGVG SNLPLDQLLT DLTKNEKGRL TPITKQQSAN SAKLTAYGTL KSALEKFQTA 
NTALNKADLF KSTVASSTTE DLKVSTTAGA AAGTYKISVT QLAAAQSLAT KTTFATTKEQ
LGDTSVTSRT IKIEQPGRKE PLEIKLDKGD TSMEAIRDAI NDADSGIAAS IVKVKENEFQ
LVLTANSGTD NTMKITVEGD TKLNDLLAYD STTNTGNMQE LVKAENAKLN VNGIDIERQS
NTVTDAPQGL TLTLTKKVTD ATVTVTKDDT KAKEAIKSWV DAYNSLVDTF SSLTKYTAVE
PGEEASDKNG ALLGDSVVRT IQTGIRAQFA NSGSNSAFKT MAEIGITQDG TSGKLKIDDD
KLTKVLKDNT AAARELLVGD GKETGITTKI ATEVKSYLAD DGIIDNAQDN VNATLKSLTK
QYLSVSNSID ETVARYKAQF TQLDTMMSKL NNTSSYLTQQ FTAMNKS