| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeSA_A2068 |
|---|
| Symbol | flhA |
|---|
| ID | 6519386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011094 |
|---|
| Strand | - |
|---|
| Start bp | 1986092 |
|---|
| End bp | 1988170 |
|---|
| Gene Length | 2079 bp |
|---|
| Protein Length | 692 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642747148 |
|---|
| Product | flagellar biosynthesis protein FlhA |
|---|
| Protein accession | YP_002114949 |
|---|
| Protein GI | 194735453 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
|---|
| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.00837735 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAATC TGGTCGCGAT GCTGCGCCTG CCCAGCAACC TGAAATCGAC GCAATGGCAA
ATTCTTGCCG GGCCGATCCT CATTCTGCTG ATTTTGTCGA TGATGGTGCT GCCGCTACCT
GCTTTTATCC TCGACTTATT GTTTACCTTT AATATTGCGC TATCGATTAT GGTGCTGCTG
GTGGCGATGT TTACCCAGCG TACTCTGGAT TTTGCCGCGT TTCCGACCAT TCTGCTGTTT
ACCACGCTAC TGCGTCTGGC GCTTAACGTA GCCTCAACGC GCATTATTTT GATGGAAGGG
CATACCGGCG CGGCGGCGGC GGGAAAGGTG GTGGAGGCGT TTGGTCATTT CCTGGTCGGC
GGTAACTTCG CGATCGGGAT TGTGGTTTTT ATCATCCTCG TCATTATCAA CTTCATGGTC
ATCACCAAAG GCGCCGGACG TATTGCCGAA GTCGGCGCGC GCTTTGTGCT GGACGGTATG
CCCGGCAAGC AAATGGCGAT TGACGCCGAT CTTAATGCCG GTCTGATTGG TGAAGACGAG
GCCAAAAAAC GGCGTTCGGA AGTCACTCAG GAAGCCGATT TCTACGGCTC GATGGACGGG
GCAAGTAAAT TTGTGCGCGG CGACGCCATC GCCGGTATTC TCATCATGGT CATTAACGTG
GTAGGCGGGC TGCTGGTCGG CGTATTGCAG CACGGAATGA GCATAGGCAG CGCGGCGGAA
AGCTACACCC TGCTGACCAT TGGCGACGGC CTGGTCGCCC AGATCCCGGC GCTGGTTATC
TCCACGGCGG CGGGCGTCAT TGTGACCCGC GTCAGTACCG ATCAGGATGT AGGCGAGCAG
ATGGTTGGCC AACTGTTCAG TAATCCAAGG GTGATGCTGC TGGCGGCGGC GGTGCTGGGG
CTGCTTGGCA TGGTGCCAGG AATGCCTAAC CTGGTATTTT TACTCTTTAC CGCCGCTTTG
CTCGGCCTGG CATGGTGGCT GCGCGGGCGT GAAGAAAAAG CGCCGGAGGA GCCGCAGCCG
GTAAAAATGC CGGAAAATAA CTCGGTGGTC GAAGCCACCT GGAATGACGT ACAGCTTGAG
GATTCACTGG GGATGGAAGT GGGCTACCGC CTGATCCCGA TGGTGGATTT TCAACAGGAT
GGCGAATTGC TCGGACGTAT TCGCAGTATT CGTAAAAAAT TCGCTCAGGA TATGGGGTTC
CTGCCGCCGG TTGTCCATAT TCGCGACAAT ATGGATTTAC AGCCTGCGCG CTACCGTATT
TTGATGAAAG GGGTAGAGAT TGGCAGCGGG GACGCCTATC CGGGACGCTG GCTGGCTATT
AACCCCGGCA CGGCGGCGGG AACGCTACCG GGTGAGAAAA CCGTCGATCC AGCTTTTGGC
CTTGATGCCA TCTGGATTGA AAGCGCCCTG AAAGAGCAGG CGCAAATTCA GGGCTTTACC
GTTGTTGAAG CCAGTACCGT TGTGGCGACG CACCTTAACC ACTTGATTGG CCAATTCTCC
GCCGAACTGT TTGGCCGCCA GGAAGCGCAG CAACTGTTGG ATCGTGTCTC TCAGGAGATG
CCTAAACTCA CGGAAGATCT GGTCCCCGGC GTCGTGACCC TCACGACTTT ACATAAAGTC
CTGCAAAACT TACTGGCGGA AAAAGTCCCG ATTCGCGATA TGCGCACCAT TCTGGAAACG
CTGGCGGAAC ATGCGCCGTT ACAAAGCGAT CCGCATGAAT TAACCGCCGT GGTACGCGTG
GCATTAGGAC GAGCGATTAC GCAACAGTGG TTCCCCGGTA ATGAAGAAGT GCAGGTGATT
GGCCTGGATA CCGCGCTGGA GCGTTTGCTG CTTCAGGCAT TGCAGGGCGG CGGTGGACTT
GAGCCGGGGT TGGCGGATCG CCTGCTGGCG CAGACGCAAG AGGCGCTTTC TCGCCAGGAG
ATGCTTGGCG CGCCGCCGGT ATTACTGGTT AACCATGCGC TACGTCCATT ATTGTCCCGC
TTTTTGCGGC GCAGTTTACC GCAGCTGGTG GTGTTGTCGA ACCTTGAGCT TTCCGATAAC
CGTCATATCC GCATGACGGC GACCATTGGA GGAAAATAA
|
|---|
| Protein sequence | MANLVAMLRL PSNLKSTQWQ ILAGPILILL ILSMMVLPLP AFILDLLFTF NIALSIMVLL
VAMFTQRTLD FAAFPTILLF TTLLRLALNV ASTRIILMEG HTGAAAAGKV VEAFGHFLVG
GNFAIGIVVF IILVIINFMV ITKGAGRIAE VGARFVLDGM PGKQMAIDAD LNAGLIGEDE
AKKRRSEVTQ EADFYGSMDG ASKFVRGDAI AGILIMVINV VGGLLVGVLQ HGMSIGSAAE
SYTLLTIGDG LVAQIPALVI STAAGVIVTR VSTDQDVGEQ MVGQLFSNPR VMLLAAAVLG
LLGMVPGMPN LVFLLFTAAL LGLAWWLRGR EEKAPEEPQP VKMPENNSVV EATWNDVQLE
DSLGMEVGYR LIPMVDFQQD GELLGRIRSI RKKFAQDMGF LPPVVHIRDN MDLQPARYRI
LMKGVEIGSG DAYPGRWLAI NPGTAAGTLP GEKTVDPAFG LDAIWIESAL KEQAQIQGFT
VVEASTVVAT HLNHLIGQFS AELFGRQEAQ QLLDRVSQEM PKLTEDLVPG VVTLTTLHKV
LQNLLAEKVP IRDMRTILET LAEHAPLQSD PHELTAVVRV ALGRAITQQW FPGNEEVQVI
GLDTALERLL LQALQGGGGL EPGLADRLLA QTQEALSRQE MLGAPPVLLV NHALRPLLSR
FLRRSLPQLV VLSNLELSDN RHIRMTATIG GK
|
|---|
| |