Gene SeSA_A1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1938 
SymboltreA 
ID6515751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1873077 
End bp1874789 
Gene Length1713 bp 
Protein Length570 aa 
Translation table11 
GC content56% 
IMG OID642747030 
Producttrehalase 
Protein accessionYP_002114831 
Protein GI194737640 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1626] Neutral trehalase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0532609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCCC CAGAGATTCG CCGTTCTGTT CTACTGCAGA AAGCCATAAA ACTGGCGCTG 
GCAGGGACGC TGCTGACGTT TGCATCGTTT TCGGCGACTG CCGCAGACCC GTCTTCCGAC
ACTGAAACTC CGCAGCCGCC GGATATTTTG CTTGGCCCGC TCTTTAATGA TGTCCAGAAT
GCAAAACTCT TCCCCGATCA GAAAACCTTT GCTGACGCCA TACCTAATAG CGATCCGCTC
ATGATTCTTG CGGATTATCG TATGCAGCGG AACCAGTCCG GCTTCGATTT GCGTCATTTT
GTTGATGTTA ACTTCACCCT GCCGAAAGCG GGTGAAAAAT ATGTCCCGCC TGCCGGGCAG
TCATTGCGTG AACATATTGA TGGCCTGTGG CCGGTGCTGA CCCGTTCAAC TAAAAACGTC
GAAAAGTGGG ACTCGCTCTT GCCGTTGCCT GAATCCTATG TCGTGCCGGG TGGGCGATTC
AGAGAGATTT ACTACTGGGA CAGCTACTTT ACGATGCTGG GGCTGGCGGA AAGCGGGCAC
TGGGATAAGG TGGCGGATAT GGTGGCGAAC TTTGGTTACG AAATTGACGC CTGGGGGCAT
ATTCCTAACG GCAACCGTAC CTACTACCTG AGTCGTTCGC AGCCGCCTTT CTTTGCGTTT
ATGATTGAGT TACTGGCGCA ACATGAAGGT GACGATGCGC TGAAAGAATA CCTGCCGCAA
CTGCAAAAAG AGTACGCCTA CTGGATGGAG GGCGTTGAGA CATTGCAGCC AGGGCAACAA
AACCAACGCG TCGTCAAACT GGAAGACGGT AGCGTTCTCA ACCGCTACTG GGACGATCGG
GATACGCCCC GCCCTGAATC CTGGGTTGAA GATATCGCTA CCGCCAAAAG CAACCCCAAC
CGCCCGGCAA CGGAGATCTA TCGAGACCTC CGCTCTGCCG CCGCCTCCGG CTGGGATTTC
AGCTCCCGCT GGATGGATAA TCCGCAGCAG CTCAGTACCA TCCGTACCAC CACGATTGTC
CCTGTCGATC TTAACGCTCT GCTGTATCAG CTGGAGAAAA CCCTCGCCCG CGCCAGCGCT
GCGGCGGGCG ATCGGGCCGA AGCCTCGCAA TATGACGCGC TGGCCAACGC GCGGCAAAAA
GCCATTGAAA TGCATCTGTG GAATAACAAA GAGGGTTGGT ATGCCGACTA CGATCTGCAG
AACAATAAAA TCCGTGACCA ACTCACCGCT GCCGCGCTGT TCCCGCTCTA TGTAAACGCC
GCCGCGAAAG ATCGCGCCGT GAAAGTGGCG GCGGCGGCCC AGGCGCATCT GCTACAGCCT
GGCGGGCTGG CTACCACCTC GGTTAAAAGC GGACAGCAGT GGGATGCGCC AAACGGCTGG
GCGCCGTTAC AATGGGTCGC TGCCGAAGGA TTACAAAATT ATGGGCAGGA TGACGTGGCA
ATGGAAGTCA CCTGGCGTTT TTTAACCAAT GTGCAGCACA CCTACGATCG CGAGAAAAAA
CTGGTCGAAA AATATGACGT CAGCAGTACC GGAACCGGCG GTGGCGGCGG CGAATATCCC
CTTCAGGACG GCTTTGGCTG GACCAACGGC GTGACGCTGA AAATGCTCGA TCTGATTTGT
CCGCAGGAAA AACCGTGTGA TAGCGTACCG TCTACTCGTC CGGCATCGTT AAGCGCAACG
CCGACAAAAA CGCCGTCTGC AGCGACGCAG TAA
 
Protein sequence
MIPPEIRRSV LLQKAIKLAL AGTLLTFASF SATAADPSSD TETPQPPDIL LGPLFNDVQN 
AKLFPDQKTF ADAIPNSDPL MILADYRMQR NQSGFDLRHF VDVNFTLPKA GEKYVPPAGQ
SLREHIDGLW PVLTRSTKNV EKWDSLLPLP ESYVVPGGRF REIYYWDSYF TMLGLAESGH
WDKVADMVAN FGYEIDAWGH IPNGNRTYYL SRSQPPFFAF MIELLAQHEG DDALKEYLPQ
LQKEYAYWME GVETLQPGQQ NQRVVKLEDG SVLNRYWDDR DTPRPESWVE DIATAKSNPN
RPATEIYRDL RSAAASGWDF SSRWMDNPQQ LSTIRTTTIV PVDLNALLYQ LEKTLARASA
AAGDRAEASQ YDALANARQK AIEMHLWNNK EGWYADYDLQ NNKIRDQLTA AALFPLYVNA
AAKDRAVKVA AAAQAHLLQP GGLATTSVKS GQQWDAPNGW APLQWVAAEG LQNYGQDDVA
MEVTWRFLTN VQHTYDREKK LVEKYDVSST GTGGGGGEYP LQDGFGWTNG VTLKMLDLIC
PQEKPCDSVP STRPASLSAT PTKTPSAATQ