Gene SeSA_A1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1840 
SymbolribA 
ID6519854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand+ 
Start bp1781408 
End bp1782085 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content51% 
IMG OID642746937 
ProductGTP cyclohydrolase II 
Protein accessionYP_002114740 
Protein GI194737687 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0570684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones6 
Fosmid unclonability p-value0.000249821 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGATGACCG CCGCCTTATG GCAAAATAGC GGGATACAAT CCAACAGGCG ACGACACCGC 
AGGCGTCAGC ATAATCTGGA GAAATACATG CAGCTTAAAC GTGTGGCAGA AGCCAAACTG 
CCAACCCCAT TGGGTGACTT TCTGATGGTG GGATTTGAAG AACTGGCAAC CGGACACGAC 
CATGCCGCGC TGGTTTTTGG CGATATTTCA GGTAAAACGC CGGTCTTGGC TCGCGTTCAT 
TCCGAATGTC TTACCGGGGA CGCGCTTTTT AGTCTGCGCT GTGATTGTGG TTTTCAACTG 
GAAGCCGCGC TGACGCATAT TGCGGAAGAA GGACGCGGTA TTCTGATTTA CCACCGTCAG 
GAAGGCCGCA ATATCGGCCT GCTTAATAAA ATTCGCGCTT ATGCGTTACA GGATCAAGGC 
TATGACACGG TGGAGGCCAA TCATCAGCTC GGCTTTGCCG CCGATGAGCG TGATTTCACC 
CTGTGCGCGG ATATGTTCAA ATTACTGGGC GTGGATGAAG TTCGCCTGCT GACCAATAAT 
CCGAAGAAAG TCGAAATACT GACCGAGGCG GGAATTAATA TCGTGGAACG CGTTCCGCTC 
ATTGTGGGTC GTAATCCAAA TAATGAGCAT TATCTCGATA CTAAAGCGGC CAAAATGGGT 
CACCTGCTAA ACAAGTAA
 
Protein sequence
MMTAALWQNS GIQSNRRRHR RRQHNLEKYM QLKRVAEAKL PTPLGDFLMV GFEELATGHD 
HAALVFGDIS GKTPVLARVH SECLTGDALF SLRCDCGFQL EAALTHIAEE GRGILIYHRQ 
EGRNIGLLNK IRAYALQDQG YDTVEANHQL GFAADERDFT LCADMFKLLG VDEVRLLTNN 
PKKVEILTEA GINIVERVPL IVGRNPNNEH YLDTKAAKMG HLLNK