Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SeSA_A1817 |
Symbol | |
ID | 6516008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 |
Kingdom | Bacteria |
Replicon accession | NC_011094 |
Strand | + |
Start bp | 1756853 |
End bp | 1758502 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642746918 |
Product | peptide transport periplasmic protein SapA |
Protein accession | YP_002114721 |
Protein GI | 194734041 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.690019 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.173891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGG TTTTATCGTC TCTGATCGTG ATAGCGGGTC TACTGAGTAG TCAGGCTACG GCTGCGGCTG CGCCCGAACA AACTGCGAGT GCAGATATTC GCGATAGCGG CTTTGTGTAT TGTGTTAGCG GGCAGGTCAA CACCTTTAAT CCGCAAAAAG CGAGCAGCGG CCTCATCGTC GATACCCTGG CCGCCCAGTT ATATGATCGC CTGTTGGATG TCGATCCCTA TACTTATCGT TTAGTCCCAG AGCTGGCAGA AAGCTGGGAA GTGCTGGATA ACGGGGCAAC GTACCGTTTT CACCTGCGCC GCGACGTTTC CTTTCAAAAA ACCGCCTGGT TTACGCCGAC CCGAAAACTC AATGCTGATG ATGTTGTCTT TACCTTTCAG CGGATTTTTG ATCGTCGGCA TCCGTGGCAT AACATCAACG GCAGTAGCTT CCCCTACTTT GATAGCCTAC AGTTCGCCGA CAATGTAAAA AGCGTGCGTA AGCTGGACAA TAACACCGTT GAGTTTCGCC TGACGCAGCC AGACGCCTCC TTTTTATGGC ATCTGGCTAC ACACTACGCT TCCGTCATGT CCGCTGAGTA CGCCGCGCAG CTTAGCCGAA AAGATCGTCA GGAACTGCTA GACCGCCAAC CGGTCGGCAC CGGGCCTTTC CAGCTTTCGG AGTACCGTGC CGGGCAGTTT ATTCGTCTCC AGCGCCACGA TGGTTTTTGG CGCGGCAAAC CGCTGATGCC GCAAGTAGTA GTGGATTTAG GCTCCGGCGG TACCGGGCGT TTATCAAAAT TACTGACCGG TGAATGCGAT GTTCTGGCCT GGCCCGCCGC CAGCCAGCTA ACTATTTTAC GCGACGATCC GCGTTTGCGC CTGACGTTGC GCCCGGGGAT GAATATCGCC TATCTGGCCT TTAACACCGA TAAGCCGCCG TTGAATAATC CCGCAGTGCG CCATGCGCTG GCCTTATCGA TCAACAACCA GCGCCTGATG CAGTCGATTT ATTACGGCAC GGCAGAAACC GCAGCCTCCA TTTTACCGAG AGCCTCATGG GCTTACGATA ACGATGCCAA AATTACGGAG TACAATCCGG AAAAATCGCG CGAACAGCTA AAAGCGCTGG GCATTGAGAA TCTTACGCTG CATCTCTGGG TGCCGACTAG TTCTCAGGCC TGGAACCCAA GTCCGCTAAA AACGGCGGAG CTTATTCAGG CGGATATGGC GCAGATTGGC GTAAAAGTGG TCATTGTGCC GGTTGAAGGT CGTTTCCAGG AGGCGCGCCT GATGGATATG AATCACGATC TGACCTTATC CGGCTGGGCC ACGGACAGCA ACGATCCGGA TAGCTTTTTC AGACCGCTGT TAAGCTGTGC AGCCATCAAT TCGCAAACCA ATTTCGCCCA CTGGTGTAAC CCTGAATTTG ACAGCGTGCT GCGTAAAGCA CTGTCGTCGC AGCAGTTGGC TTCGCGCATA GAAGCGTATG AGGAAGCGCA GAATATCCTG GAGAAAGAGC TGCCGATACT GCCGCTGGCA TCATCACTAC GCCTGCAGGC TTACCGCTAC GATATTAAAG GGCTGGTGTT AAGCCCGTTC GGCAATGCGT CTTTTGCCGG CGTCTCCCGC GAAAAACACG AAGAGGTGAA AAAACCATGA
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Protein sequence | MRLVLSSLIV IAGLLSSQAT AAAAPEQTAS ADIRDSGFVY CVSGQVNTFN PQKASSGLIV DTLAAQLYDR LLDVDPYTYR LVPELAESWE VLDNGATYRF HLRRDVSFQK TAWFTPTRKL NADDVVFTFQ RIFDRRHPWH NINGSSFPYF DSLQFADNVK SVRKLDNNTV EFRLTQPDAS FLWHLATHYA SVMSAEYAAQ LSRKDRQELL DRQPVGTGPF QLSEYRAGQF IRLQRHDGFW RGKPLMPQVV VDLGSGGTGR LSKLLTGECD VLAWPAASQL TILRDDPRLR LTLRPGMNIA YLAFNTDKPP LNNPAVRHAL ALSINNQRLM QSIYYGTAET AASILPRASW AYDNDAKITE YNPEKSREQL KALGIENLTL HLWVPTSSQA WNPSPLKTAE LIQADMAQIG VKVVIVPVEG RFQEARLMDM NHDLTLSGWA TDSNDPDSFF RPLLSCAAIN SQTNFAHWCN PEFDSVLRKA LSSQQLASRI EAYEEAQNIL EKELPILPLA SSLRLQAYRY DIKGLVLSPF GNASFAGVSR EKHEEVKKP
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