Gene SeSA_A1682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSeSA_A1682 
Symbol 
ID6516833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 
KingdomBacteria 
Replicon accessionNC_011094 
Strand
Start bp1616561 
End bp1618258 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content53% 
IMG OID642746788 
Productmalate dehydrogenase 
Protein accessionYP_002114591 
Protein GI194734905 
COG category[C] Energy production and conversion 
COG ID[COG0281] Malic enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.638669 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACTA CAACCAAGAA AGCACGTTCC CTTTATATCC CTTACGCTGG CCCTGTATTG 
CTGGAATTCC CCCTGTTAAA CAAAGGCAGC GCTTTTAGCG TAGAAGAGCG CCGCAACTTC
AATTTGTCAG GGCTGCTGCC GGAGGTCGTC GAGTCGATTG AAGAACAGGC CGAACGCGCC
TGGCTCCAGT ATCAGGGGTT TAAAACAGAA ATCGATAAGC ATATTTACCT GCGTAACATC
CAGGATACCA ACGAAACGCT CTTTTATCGA CTGGTGCAAA ACCATCTTGA AGAGATGATG
CCGGTTATCT ATACCCCGAC CGTGGGCGCG GCCTGTGAGC GCTTCTCTGA GATTTATCGC
CGGGCGCGCG GCGTATTTAT CTCTTATCCG AACCGTCACA ATATGGACGA CATTTTGCAG
AATGTGCCTA ACCACAACAT TAAAGTTATT GTGGTGACGG ATGGCGAGCG GATTCTGGGG
CTCGGCGATC AGGGCATCGG CGGGATGGGG ATCCCTATCG GTAAGCTGTC ATTATACACC
GCCTGCGGCG GCATTAGTCC GGCCTATACC CTTCCCGTTG TGCTGGATGT CGGCACCAAC
AATCAACAGT TACTCAACGA TCCGCTTTAC ATGGGCTGGC GTCATCCGCG CATTACCGAC
GATGAGTATT ATGCGTTTGT CGACGAGTTT ATTCAGGCCG TTAAGCAGCG CTGGCCAGAT
ATCCTGCTAC AGTTCGAAGA TTTCGCGCAG AAAAACGCAA TGCCGCTGTT GACGCGCTAT
CGTGATGAGA TTTGCTCCTT TAACGATGAT ATTCAGGGCA CCGCAGCCGT GACCGTCGGT
ACGTTGATCG CCGCCAGCCG CGCTGCCGGC AGTCAGCTTA GCGAGCAGAA AATCGTTTTC
CTCGGCGCGG GTTCCGCCGG ATGTGGAATT GCTGAACAGA TCATCGCGCA GACTCAGCGT
GAAGGTTTAA GCGAAGATGC CGCTCGACAG AACGTTTTTA TGGTCGATCG CTTCGGCCTG
TTGACGGACC GGATGCCTAA TTTATTGCCG TTCCAGGCAA AACTGGTGCA GAAATGCGAC
AATCTCCAGC ACTGGGATAC CGAAAATGAC GTGCTGTCGC TGCTGGATGT GGTGCGTAAC
GTGAAGCCGG ATATTCTGAT CGGGGTTTCC GGCCAGACCG GGCTCTTTAC TGAAGAGATC
ATCCGCGAGA TGCATAAGCA TTGCCCTCGC CCGATCGTCA TGCCGCTCTC TAATCCCACC
TCTCGCGTGG AGGCCACGCC ACAGGACATT ATCGCCTGGA CGGAAGGCAA CGCGCTGGTG
GCGACCGGTA GTCCATTCTC GCCGGTCATC TGGAAAGATA AGGTTTATCC GATCGCACAA
TGTAATAACG CCTATATTTT CCCCGGCATC GGTCTGGGGG TTATCGCTTC CGGCGCATCG
CGCATTACTG ATGAAATGCT GATGTCAGCC AGTGAGACGC TGGCGAAACA TTCTCCGCTG
GTGAATAACG GCGAAGGATT AGTGTTGCCA GCGCTTAAAG ACATCCAGGT CGTGTCGCGC
GCTATCGCTT TTGCCGTAGG CAAAATGGCG CAGCAACAAG GCGTAGCGGT GAAAACCTCT
GCGGAAGCGC TACAACAGGC GATTGACGAT AACTTCTGGA AACCGGAATA CCGCGACTAC
CGTCGGACTT CCATTTAA
 
Protein sequence
METTTKKARS LYIPYAGPVL LEFPLLNKGS AFSVEERRNF NLSGLLPEVV ESIEEQAERA 
WLQYQGFKTE IDKHIYLRNI QDTNETLFYR LVQNHLEEMM PVIYTPTVGA ACERFSEIYR
RARGVFISYP NRHNMDDILQ NVPNHNIKVI VVTDGERILG LGDQGIGGMG IPIGKLSLYT
ACGGISPAYT LPVVLDVGTN NQQLLNDPLY MGWRHPRITD DEYYAFVDEF IQAVKQRWPD
ILLQFEDFAQ KNAMPLLTRY RDEICSFNDD IQGTAAVTVG TLIAASRAAG SQLSEQKIVF
LGAGSAGCGI AEQIIAQTQR EGLSEDAARQ NVFMVDRFGL LTDRMPNLLP FQAKLVQKCD
NLQHWDTEND VLSLLDVVRN VKPDILIGVS GQTGLFTEEI IREMHKHCPR PIVMPLSNPT
SRVEATPQDI IAWTEGNALV ATGSPFSPVI WKDKVYPIAQ CNNAYIFPGI GLGVIASGAS
RITDEMLMSA SETLAKHSPL VNNGEGLVLP ALKDIQVVSR AIAFAVGKMA QQQGVAVKTS
AEALQQAIDD NFWKPEYRDY RRTSI